Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90663g00007 ATGGCAGATTCATTGTTGAGGGTGGAGCACATAGCAGGAAAAGGAAGAGGCCTTGTAGCTTCACAACCTCTGAAATGTGGTCAAGTTATTCTCACTGAATCCCCTCTCATTCTCTACTCTTCTTCCCCTCTCTTCCCTCCTTCTTCTTCTTCTTCTTCTTCTTACTGTAACCACTGCTTCAGAACCCTGCTACCTACCACCACCACTGCTTCATGTCCTTCTTGTCTCACCCACCATTTCTGCAGCAACAAGTGCCTCTCTTCATCCCTTAACTCCTCTCACTCCTCCATTGTTTGCCAAGCACTCTCATCACTTCGAAATTCACCACTGCTTCAGCAACAACCCCTTCAACGCCAAGTCCAAGCTCGTTTTCTTGTTGCTCTTCACAACCTTGCACCTTCTCAGATTGATACTTTGCTCTCTCTCCATGGCACCCCGGATGATTCTGTTCTTCAAGATGCAAACTTTCTTCATGATCTGATCTCACCCCTTTTTAACAACAAGCTTATTAGTGTTGATGTGATTGCTGAGGCTCTTGCAAAGGATAGGATCAATTCCTTCTGCTTGATGGAGCCTTATAACTCTGATGGACCTCAGAGATCCATTAAGGCATATGGGATATACCCAAAAGCCACAATGTTTAACCATGATTGTCTTCCCAATGCATGCAGGTTTGATTATGTGGACACTACTGATAATGATGAAGATGATGATGGGCCTAACAACAACACTGACATTATTATAAGGTTGATTAAGGATGTTGATGAAGGAGAAGAGGTTTGCATAAGCTATTTTAGGATTGGGAGGGATTATGCTACAAGGAAGAAGATCTTGATGGAGGATTATGGGTTTGTTTGTGGGTGTGAGAGGTGCAACATTGAAGCAACTTGGAGAGAAGATGAGATTGATGATGATGTGGCACATGTAAGGTTTTTGAGGAAGTATGTTTGTGATATGAAGAATTGTGGTGGCACTATGGCTCCTCTTCCTCCAAAACATGATTCATCATCACCATCTAATGTTCTTGAGTGTAATTTTTGTGGCAATTTCAAAATCAGTGATGATCATGTTATATAG 1077 0.4234 MADSLLRVEHIAGKGRGLVASQPLKCGQVILTESPLILYSSSPLFPPSSSSSSSYCNHCFRTLLPTTTTASCPSCLTHHFCSNKCLSSSLNSSHSSIVCQALSSLRNSPLLQQQPLQRQVQARFLVALHNLAPSQIDTLLSLHGTPDDSVLQDANFLHDLISPLFNNKLISVDVIAEALAKDRINSFCLMEPYNSDGPQRSIKAYGIYPKATMFNHDCLPNACRFDYVDTTDNDEDDDGPNNNTDIIIRLIKDVDEGEEVCISYFRIGRDYATRKKILMEDYGFVCGCERCNIEATWREDEIDDDVAHVRFLRKYVCDMKNCGGTMAPLPPKHDSSSPSNVLECNFCGNFKISDDHVI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90663g00007 358 Gene3D SET domain 17 291 IPR046341 -
Stsc90663g00007 358 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 303 355 IPR044238 -
Stsc90663g00007 358 Gene3D - 55 112 - -
Stsc90663g00007 358 Pfam SET domain 15 264 IPR001214 GO:0005515
Stsc90663g00007 358 CDD SET_SMYD 185 291 - -
Stsc90663g00007 358 Gene3D - 113 186 - -
Stsc90663g00007 358 ProSiteProfiles SET domain profile. 1 265 IPR001214 GO:0005515
Stsc90663g00007 358 SMART set_7 4 271 IPR001214 GO:0005515
Stsc90663g00007 358 SUPERFAMILY SET domain 4 286 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90663g00007 Stsc-Chr90663 48539 49716 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc90663g00007 SET 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90663g00007 - - gmx:100808530 419.083