Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90663g00004 ATGAAAGACAGGGAAAAGGTGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCACCAGCGTGGATATTTCCACCGTGATCTGAAGCCTGAGAACTTGCTGGTTACCAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCACGCGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTACTTCAGTCTTATATGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTCTCTCTTCGTCCCCTTTTCCCGGGTGCCAGTGAAGCGGATGAAATCTACAAAATATGTGGTGTAATAGGCAGCCCAACTATTGAGTCATGGGCTGATGGGCTGAAACTTGCAAGGGATATAAACTATCAGTTCCCACAGTTTGCTGGTGTACATCTTTCGGCAGTGATACCATCTGCAAGTGATGATGCAGTCAGCCTTATCAAGTCACTTTGCTCGTGGGATCCATGCAAGAGGCCAACAGCTGCAGAGGCCCTTCAACATCCCTTTTTCCAGACTTGTTTTTACATTCCTCCGTCCCTTCGTACTAGAGCAGTGTCGAGAACTCCTCCATCTGCTGGAACAAGGGGAGCCCTTGATCAGCAAGGGGTTAGGAGATATTCTGGGGCGTTGCCTAATTCAAAGCTCACCAATAACTTCTCTTCTCCGAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGTAAGCTGGATATGGTGAATCAGAATGGAAATAAGAATGAGAAGTCCATGAATACTGTTAAACAACCAAAATTTCGACAGCCCGGAAAAGACAGCCCAACTTCTATGAACAAGGGGAGGAATGCGAGGGCAATTTCTGAAACAACCGATAGGTTGGCCAATATGAATGTTGGTAGTGGTACTCGAAGACATTCTATAGCGCAACATCGCCCTCCTCCAATGAAGGCTGGAGTTAATTGGATTTCTGAATCTGGAAACTTCATGCTGAGACCTGCACAGCCGATACCGACTGGAAGAACTTTCAGTCGAAAGGTTGCTGGATGA 1095 0.4584 MKDREKVFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYMYSSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGSPTIESWADGLKLARDINYQFPQFAGVHLSAVIPSASDDAVSLIKSLCSWDPCKRPTAAEALQHPFFQTCFYIPPSLRTRAVSRTPPSAGTRGALDQQGVRRYSGALPNSKLTNNFSSPKLHPPLASGVQRKLDMVNQNGNKNEKSMNTVKQPKFRQPGKDSPTSMNKGRNARAISETTDRLANMNVGSGTRRHSIAQHRPPPMKAGVNWISESGNFMLRPAQPIPTGRTFSRKVAG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90663g00004 364 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 264 - -
Stsc90663g00004 364 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90663g00004 364 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90663g00004 364 SUPERFAMILY Protein kinase-like (PK-like) 6 198 IPR011009 -
Stsc90663g00004 364 MobiDBLite consensus disorder prediction 259 298 - -
Stsc90663g00004 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 32 44 IPR008271 GO:0004672|GO:0006468
Stsc90663g00004 364 Pfam Protein kinase domain 4 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90663g00004 364 Gene3D Transferase(Phosphotransferase) domain 1 1 200 - -
Stsc90663g00004 364 MobiDBLite consensus disorder prediction 232 248 - -
Stsc90663g00004 364 FunFam serine/threonine-protein kinase MAK isoform X1 1 204 - -
Stsc90663g00004 364 MobiDBLite consensus disorder prediction 232 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90663g00004 Stsc-Chr90663 26246 30276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90663g00004 13 195 Core Cell Cycle Gene Families AT3G48750 40.323 3.59e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Stsc90663g00004 Pkinase 4.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90663g00004 K08829 - gmx:100810150 642.884