Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90662g00025 ATGGGCCAAAATCAAAAACCAAAGTTACATATGCATTGCCATTATTGGCTGCTAAGTTCTTTGACTCTGGTCCTTCTCAGCATCTCATTATGCTCTTGCTTTGACACCATATCCACTGACAAAGCCCTCAGAGATGGTGAGATTCTTGTTTCTAGGGACAAAACTTTTGCCATGGGGTTCTTCAGCCCAGGCAAGTCAACTTCCCGCTACGTCGGAATCTGGTACAACAATCTGCCACAACAAACTGTTATTTGGGTTGCAAACAGAAACACTCCCATCAATGACACATCTGGAGTCCTTTCAATCAACCAACATGGAAATCTAGCACTCCACCACAACCATAGCATTCTTCCAATTTGGACTACCAATGTTTCAGCCACACCCTCTGACGCAAACAAAGTTATAGCTCAACTCACAGACATAGCCAACCTTGTGCTGATCCTTAACGACACAAAAGCAGTCATCTGGCAAAGCTTTGATCAACCCACAGATACTTTGATTCCCCATCTGAGATTAGGATTTGACAGAGGAACAAACCAGAGTTGGATCATCCAATCTTGGAAAACAGATGATGATCCTTCACCTGGTGACTTCGCATTGAAGTTCAGCACCAGTGGTATGCCACAGTTGTTCTTATACAACAAGAATCTTCCATGGTGGCGAGGAGGACCGTGGAACGGTGAGTTTTTCATGGGTATACCCAACATCAAACGAGATAACAACATTTTCAATGTTTCCTGTGAGGAAGATGAGAACCATGCATCACTCTCATATAACACCTATGACAAATCGGTTCCCAGTTGGGTGGTTGTTCAGCAGTCTGGTTTCTTTCAAGTGTTCACTTGGGATAACCAGAAGAATCATTGGAACCGGTACTGGTCAGAGCCTACTGGTCAATGTGATAACTATGGAACTTGTGGACCTAACAGCAACTGTGACCCTTTGAACTATGAGGACTTTCAGTGCACTTGTTTGCCCGGGTTTGAACCGAAATTCCCGAGTAACTGGTATGAGAACAGAGATGGATCAGGAGGGTGTGTGAGGAAGAAAGGTGTATCTGTTTGTGGGAGTGGAGAAGGGTTTGTGAATATTGAAGGATTGAAGATTCCTGATACATCTGTGGCTATAGTTAAGGAGGGTTTGAGCTTGGAGGAGTGTGAGAAGGAATGCTTGAGAAACTGTTCTTGCAGTGCTTATGCAGTTGCTAATGTGGCCAATGGTGGAAGTGGATGTTTTGCATGGCATGGTGATCTGTTGGACATAGAGAAGCTTAGTGATCAAGGCCAAGAATTATTTGTACGTGTTGATGCTGTTGAATTAGCTAATTATTACAAGAAAACAAAAGAAGCATTTGGTAAGAAAGAGATTGTAGGGGTTCTGGTAGCTTCTTTGTTTGCAGTTCTTCTTATTCTGGCCTGTGTATATTACTTGCGGTTGCAGAAGAAAAAGAAAAAAGATAAAATGATGCGGCAATTGAGTCAAGATTCTCCTAGAGAAAAGAATGACATTCAAAGTAAAAGAAATCTAAATCTTCCCCTCTTCAGCATTAAAATAATTATGGCAGCCACACAAAATTTTGCTCCAGAGAATAAACTTGGACAAGGTGGATTTGGTTCTGTCTATAAGGGTCAGCTATACAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAAAGATTCTGGACAAGGGATAGAAGAATTTAAAAATGAAGTTACACTATTAGTTAAACTTCAACACAGAAATCTTGTGAGATTGCTTGGTTGTTGCCTTGAAAAGGAAGAAAGAATGCTAGTCTATGAATACCTTCCAAACAAAAGTTTGAACTTCTTTATATTCGATAAGATCCAAAGGTCGTCACTAGATTGGGATAAGCGTTTTGAAATTATTTACGGGATTGCTCGAGGTGTATTATATCTTCATCAAGATTCAAGATTAAAAATAATTCACAGAGATCTCAAAGCTAGCAATGTTCTCCTTGATGCTGCAATGAATCCAAAAATCTCAGACTTTGGCATGGCTAGAATATTTGGCGAAGATCAAATCCAAGATAGAACGAGAAGAGTAGTTGGTACATATGGTTATATGTCACCCGAATATGCAATGGAAGGACGATATTCAACAAAATCAGACGTCTTTAGTTTTGGAGTATTACTTCTAGAGATTATTGCCGGAAAGAGGAACACTGATGGTGGTGACAAAGAAAGAGCCTCCCCAAATTTAATTGGATATGTATGGAGACTGTGGACAGAAGGAAGGGCTTTGGATATGGTAGACACAACACTAGACCAATCTTATCCTTCTGAGATAGCTCTGAAGTGCATTCAAATTGGACTATTGTGTGTGCAAGAAAATGTCAACAAGAGACCTTCCATGTCAGAAGTTGTTTTCATGTTAGGGAATGAAGCACCTATTTGTCCACCTCAAAAGCCAGCATTTTTATTCAATGGCAACCAAGATGACTTGCAAGAGTCATCAACATCTGGAGGAGGATCCTCAATTAATGAAGTAACAGCAACTACAATCTCTGCTAGATAA 2535 0.4051 MGQNQKPKLHMHCHYWLLSSLTLVLLSISLCSCFDTISTDKALRDGEILVSRDKTFAMGFFSPGKSTSRYVGIWYNNLPQQTVIWVANRNTPINDTSGVLSINQHGNLALHHNHSILPIWTTNVSATPSDANKVIAQLTDIANLVLILNDTKAVIWQSFDQPTDTLIPHLRLGFDRGTNQSWIIQSWKTDDDPSPGDFALKFSTSGMPQLFLYNKNLPWWRGGPWNGEFFMGIPNIKRDNNIFNVSCEEDENHASLSYNTYDKSVPSWVVVQQSGFFQVFTWDNQKNHWNRYWSEPTGQCDNYGTCGPNSNCDPLNYEDFQCTCLPGFEPKFPSNWYENRDGSGGCVRKKGVSVCGSGEGFVNIEGLKIPDTSVAIVKEGLSLEECEKECLRNCSCSAYAVANVANGGSGCFAWHGDLLDIEKLSDQGQELFVRVDAVELANYYKKTKEAFGKKEIVGVLVASLFAVLLILACVYYLRLQKKKKKDKMMRQLSQDSPREKNDIQSKRNLNLPLFSIKIIMAATQNFAPENKLGQGGFGSVYKGQLYNGQEIAVKRLSKDSGQGIEEFKNEVTLLVKLQHRNLVRLLGCCLEKEERMLVYEYLPNKSLNFFIFDKIQRSSLDWDKRFEIIYGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDQIQDRTRRVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTDGGDKERASPNLIGYVWRLWTEGRALDMVDTTLDQSYPSEIALKCIQIGLLCVQENVNKRPSMSEVVFMLGNEAPICPPQKPAFLFNGNQDDLQESSTSGGGSSINEVTATTISAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90662g00025 844 MobiDBLite consensus disorder prediction 815 844 - -
Stsc90662g00025 844 Pfam PAN-like domain 355 421 IPR003609 -
Stsc90662g00025 844 ProSiteProfiles PAN/Apple domain profile. 355 436 IPR003609 -
Stsc90662g00025 844 Gene3D Transferase(Phosphotransferase) domain 1 602 803 - -
Stsc90662g00025 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 23 790 - -
Stsc90662g00025 844 CDD STKc_IRAK 532 798 - -
Stsc90662g00025 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 490 601 - -
Stsc90662g00025 844 CDD B_lectin 43 162 IPR001480 -
Stsc90662g00025 844 Gene3D - 31 159 IPR036426 -
Stsc90662g00025 844 ProSiteProfiles Bulb-type lectin domain profile. 34 159 IPR001480 -
Stsc90662g00025 844 SMART blect_4 40 162 IPR001480 -
Stsc90662g00025 844 PIRSF SRK 6 844 IPR024171 GO:0004674
Stsc90662g00025 844 Gene3D Hepatocyte Growth Factor 353 433 - -
Stsc90662g00025 844 Gene3D Phosphorylase Kinase; domain 1 499 601 - -
Stsc90662g00025 844 SMART ntp_6 356 435 IPR003609 -
Stsc90662g00025 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 193 IPR036426 -
Stsc90662g00025 844 Pfam D-mannose binding lectin 82 188 IPR001480 -
Stsc90662g00025 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 159 - -
Stsc90662g00025 844 Pfam S-locus glycoprotein domain 220 332 IPR000858 GO:0048544
Stsc90662g00025 844 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Stsc90662g00025 844 SUPERFAMILY Protein kinase-like (PK-like) 509 814 IPR011009 -
Stsc90662g00025 844 CDD PAN_AP_plant 355 435 - -
Stsc90662g00025 844 ProSiteProfiles EGF-like domain profile. 296 334 IPR000742 -
Stsc90662g00025 844 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524
Stsc90662g00025 844 ProSiteProfiles Protein kinase domain profile. 526 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00025 844 SMART serkin_6 526 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00025 844 Pfam Protein tyrosine and serine/threonine kinase 529 796 IPR001245 GO:0004672|GO:0006468
Stsc90662g00025 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Stsc90662g00025 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90662g00025 Stsc-Chr90662 155591 159201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90662g00025 514 844 Receptor kinase-like Gene Family AT4G11530 56.380 1.07e-124 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90662g00025 PK_Tyr_Ser-Thr 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90662g00025 - - tpra:123918163 1219.53