Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90662g00024 ATGGCCAAAAACCATTATTCTCTGCTTAGTTCTTTGAGTCTAGTCCTTATCAGCATCTCACTTACCTCATGTTCTGATACAATTACCATTGACAAACCCCTTAGAGATGGTGAGATTCTTGTTTCTAAGAGCAAAACCTTTGCCATGGGATTCTTTAGTCCAGGCAGATCCACTTCCCGTTACATTGGAATCTGGTACAACAACTTGCCAGAACAAACTGTCATTTGGGTTGCAAACAGAAACACTCCTATCAACGACACATCCGGGGTTCTCTCAATCAACCAACATGGAAATCTAGCAATTCATAACAATTATACCACTCTTCCAATTTGGTCTTCAAATGTTTCATTCACACCCTCCAACAACCACGTTGTAGCTCAACTCTTGGACACAGCAAACTTTGTTCTGTTCCTAAACAATACGGGAACTATCATCTGGCAAAGCTTTGATGAACCTACAGACACCTTCATTCAGCACTTGAAAGTTGGTTTTGACAGAAGAAGTAACAAGAGCTGGTTCCTCCAATCATGGAAGACAGACGATGACCCTGCACCTGGTGCATACACGTTGGCATTCAACCCCAATGGGAAGCCACAGCTGTTCTTGTACAACAAGAACATTCCATGGTGGCGAGGAGGATCATGGAACGGTGAATTGCTCATGGGTATACCAAACATGAAACGAGACATGCTCAAATTCAACATTTCTTATGAGGAAGATGAGAATCATTCAGCACTCTCGTACACCATGTTTGATGAGTCCATTGTGAGCAGAATAGTGGTTCAGCAATCAGGTTTCTTTCAAGTGTTCACTTGGGATTTCCAGAATAGTCAATGGAACAGGTACTGGTCAGAACCAACAGGACTATGTGATAACTATGGAACCTGTGGATCTAACAGTAACTGTGACCCTTTGAACTACGATGAGGTCTTTCAGTGTAGTTGTTTACCCGGGTTTGAGCCCAAGTTCCCGCGAAACTGGTATGAGAACAAAGATGGATCCGGAGGGTGTGTGAGGAAGAAAGGTGTGTCTATTTGTGGGAAAGGAGAAGGGTTTGTGAAGATTGAAAGCTTGAAGATTCCTGATACATCTGGGGTAACAGTTAAAAAGGGTTTGAGTTTGAATGAGTGTGAAAAAGAGTGTTTGAGAAACTGCACTTGCAATGCATACTCTGTTGCCGATGTTAGGAACAGTGGAAGTGGGTGCATAACATGGCATGGGGACTTGATGGACATACAGAAGCTCAGTGATCAAGGCCAAGATCTTTTTGTCCGTGTCGACTCGGTTGAACTAGCCAAGTACTATAAGAAACAAAGGTTATTTGGCAAAAACAAGTTGGTAGCGGCTCTGGTAGCTTTCATTCTTCTGGTTCTCCTTCTGGCTTCCAGTGTGTATTACTTGTGGAAGAAGAGTAAAAACAAAGACAAAATGAAGTGGGACTTAACTCATGATTCTTCAAGAGAAGAAAACCATGTTCAAAGAAAAAGACATCCAAACCTCCCCTTATTCAGTTTTAAAATAATAATGGCAGCCACAGAAAAATTTTCTCCAGATAATAAGCTTGGCCAAGGTGGATTTGGCTGTGTCTATAAGGGCCAACTCTTTGATGGACCTGAGATAGCAGTAAAAAGACTATCCAAAGATTCAGGTCAAGGAATAGAAGAGTTCATAAATGAAGTTACGCTGCTAGTTAAACTCCAACACAGAAATCTTGTGAAGTTGCTCGGTTGTTGCCTTGAGAAGGAAGAAAGGATGCTAGTCTATGAATACCTTCCGAACAAAAGCCTAGACTACCTTATATTTGATGAAGTTCGAAGGTCATCGTTAGATTGGGGTCACCGCTTTAAAATTATTTCGGGAATTGCTCGAGGTGTATTATATCTTCATCAAGATTCAAGACTGAAAATAATTCATAGAGATCTAAAAGCCAGTAATGTTCTTCTCGATGCGGCAATGAATCCTAAAATTTCAGACTTTGGAATGGCTAGAATATTTGGAGAAGAACAAATCCAAGCAAGTACAAAAAAAGTAGTTGGAACATATGGTTATATGTCACCTGAATATGCAATGGAAGGACGATACTCCACAAAATCCGATGTCTTCAGTTTCGGAGTCTTGTTATTGGAGATTATTGCTGGAAAAAGAAACACAAATTGTGAAAAAGGAAGAGCAGCCTCGTTAATTGGATATGTGTGGAAACTTTGGACTGAAGGAAGAGCTTTGGATGTAGTAGATTCAACACTAGGTCAATCTTATCCTGCTGAAATAGCACTGAGGTGCATTCAAATTGGACTATTGTGTGTGCAAGAAAGCGCCAATAATAGACCTTCCATGTTAGAAGTTGTTTTCATGCTACGAAATGAAGCACCTATTTGCTCACCCAAGAAGCCAGCATTTTTATTCAATGGCAACCTGGACATGAAAGATTCATCAAGTTCTGGAGGAGAATCTTCAGTAAATGAAGTGACAGTAACTACCATCTCTGCTAGATAA 2493 0.4071 MAKNHYSLLSSLSLVLISISLTSCSDTITIDKPLRDGEILVSKSKTFAMGFFSPGRSTSRYIGIWYNNLPEQTVIWVANRNTPINDTSGVLSINQHGNLAIHNNYTTLPIWSSNVSFTPSNNHVVAQLLDTANFVLFLNNTGTIIWQSFDEPTDTFIQHLKVGFDRRSNKSWFLQSWKTDDDPAPGAYTLAFNPNGKPQLFLYNKNIPWWRGGSWNGELLMGIPNMKRDMLKFNISYEEDENHSALSYTMFDESIVSRIVVQQSGFFQVFTWDFQNSQWNRYWSEPTGLCDNYGTCGSNSNCDPLNYDEVFQCSCLPGFEPKFPRNWYENKDGSGGCVRKKGVSICGKGEGFVKIESLKIPDTSGVTVKKGLSLNECEKECLRNCTCNAYSVADVRNSGSGCITWHGDLMDIQKLSDQGQDLFVRVDSVELAKYYKKQRLFGKNKLVAALVAFILLVLLLASSVYYLWKKSKNKDKMKWDLTHDSSREENHVQRKRHPNLPLFSFKIIMAATEKFSPDNKLGQGGFGCVYKGQLFDGPEIAVKRLSKDSGQGIEEFINEVTLLVKLQHRNLVKLLGCCLEKEERMLVYEYLPNKSLDYLIFDEVRRSSLDWGHRFKIISGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEEQIQASTKKVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTNCEKGRAASLIGYVWKLWTEGRALDVVDSTLGQSYPAEIALRCIQIGLLCVQESANNRPSMLEVVFMLRNEAPICSPKKPAFLFNGNLDMKDSSSSGGESSVNEVTVTTISAR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90662g00024 830 Gene3D Transferase(Phosphotransferase) domain 1 591 792 - -
Stsc90662g00024 830 Pfam PAN-like domain 346 412 IPR003609 -
Stsc90662g00024 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Stsc90662g00024 830 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Stsc90662g00024 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 792 - -
Stsc90662g00024 830 ProSiteProfiles Protein kinase domain profile. 515 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00024 830 Gene3D Hepatocyte Growth Factor 344 424 - -
Stsc90662g00024 830 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Stsc90662g00024 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Stsc90662g00024 830 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 777 - -
Stsc90662g00024 830 CDD STKc_IRAK 521 785 - -
Stsc90662g00024 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 149 - -
Stsc90662g00024 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 216 IPR036426 -
Stsc90662g00024 830 SMART blect_4 31 152 IPR001480 -
Stsc90662g00024 830 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Stsc90662g00024 830 Pfam D-mannose binding lectin 73 178 IPR001480 -
Stsc90662g00024 830 CDD PAN_AP_plant 346 426 - -
Stsc90662g00024 830 MobiDBLite consensus disorder prediction 809 830 - -
Stsc90662g00024 830 Gene3D - 20 149 IPR036426 -
Stsc90662g00024 830 SMART serkin_6 515 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00024 830 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Stsc90662g00024 830 SUPERFAMILY Protein kinase-like (PK-like) 498 804 IPR011009 -
Stsc90662g00024 830 Pfam Domain of unknown function (DUF3403) 788 830 IPR021820 GO:0004674
Stsc90662g00024 830 CDD B_lectin 31 152 IPR001480 -
Stsc90662g00024 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 480 590 - -
Stsc90662g00024 830 Gene3D Phosphorylase Kinase; domain 1 488 590 - -
Stsc90662g00024 830 SMART ntp_6 347 426 IPR003609 -
Stsc90662g00024 830 Pfam Protein tyrosine and serine/threonine kinase 518 782 IPR001245 GO:0004672|GO:0006468
Stsc90662g00024 830 Pfam S-locus glycoprotein domain 210 323 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90662g00024 Stsc-Chr90662 151171 154752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90662g00024 442 830 Receptor kinase-like Gene Family AT4G05200 51.225 2.13e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90662g00024 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90662g00024 - - tpra:123914661 1181.01