Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90662g00023 ATGTCTTATTCCTTTTTTCTTCTGTTATTGCTCCTTTACCCTCCTTGTTGCAACTCACTTGACACCATAACACCACACCAACCCCTTAATGACGGCGATGTTCTTCTCTCCAAAGACCGAGGAGCCTTTGCACTGGGTTTCTTCAGCCCTGCAAATTCTAAAAGCCGCTACCTTGGGATATGGTTCAACAACATCTCACAGCAAACCGTTGTCTGGGTTGCAAACAGAGACACCCCTCTTAACACCACTTCAGGTGTTCTCTCCATCAACAACCATGGAAACCTCGTACTCCACGACCATAACAACTCATTCCTTAAACCCGTCTGGTCCTCACACGTTTCTGTTTCAACCATGTCTACCAACGCTTCAGCAAAGCTCTTAGACACTGGAAACTTCGTTTTGATCCAAAGCAGCAACAACAGCGACAAAGTTTTGTGGCAGAGTTTTGATTACCCTGGCAACACTTACCTTCCTTACATGAAGCTCGGGTTCGACCGTAAAACCGGGTTGAACCGGTCTCTAACATCATGGAAATCCCCGAGCGACCCGGGAACCGGTAACGCGACATACAAGATGGACCGGACCGGGTTCCTACCGCAACTATTTCTGTACGCAAACAATGCTCCCTTGATGCGGGTTGGGCCGTGGACCGGTCTAAGATTAGCCGGGGCAGCGGAGATGACTCAAGACTTCATCTTCAGCTTCTTCTTCATCGATGATTCAAACGAAGTTTCCTCAATCTACAGAGTAAACGATCCAAACCTGCTTTCGATCTCTCTTCTGGAGGAAACCGGATACTTAAGGCGGTTAGTATGGCAAGGTCGCGAGGGGAAGTGGTTCGAGCTGTGGAACGGTCCACGGGAAGAGTGTGATCACTATAGAAGATGCGGGTCAAATTCCATTTGTAACCCTTATCATGAGGAGACGTTCTTATGCCAGTGCTTGCCAGGATTTGAACCCAAATCGGAGAGAGAGTGGTATCTGAAAGATGGATCGAGTGGGTGTGTGAGGAAGGCAAACGTGTCCACGTGTAGAAGCGGGGAGGGGTTTGTGGAGTTGGAGCTTGTGAAGGCGCCGGATACATCTAAGGCGAGTGTGAATTTGGGGGTGAGTATGGAAGAGTGTAGGGATATGTGCCTTAGGGATTGTTCTTGTGCTGCGTATACGAGTGCTAATCAGAGCTCAAATAGTGGTTGTATTACTTGGCATGGAGATATGGAAGATACTAGAAAATTCTCACAAGTCGGACAAACTTTGTTTGTACGTGTGGATGCACTTGAATTGGCTAAATATGCAAAACATAATGGGCATGGTTCTCCAATTGGCAAGAAAAAGATGGCGGCTATTCTAGCGGTTTCTATTTTCTTCTTCCTGTTTTTGGTCGCCACCATCGTCATGTATTGGTTTTTGAAGGTTAGGAAGCAATTTGGGAGAAGAAGGAATAATAAGCATTCTTCCTTTCGTATTCACGTTGAGGAGAATCTACAAAATTTTGACAATTCAAAACATTCAGATTTGCCTTTGCTCTTTGATTTAGCCTCTATAACTTCTGCGACTGAGCGTTTTTCTCCTGCTAACAAGCTTGGTCAAGGTGGATTTGGTTCTGTATATAAGGGTTGTTTAATTAATGGAAGAGAAATAGCAGTAAAACGATTATCCAAAAATTCCGGTCAAGGAACAGAAGAGTTTAAAAATGAAGTTACACTTTTAGCGAAACTTCAACACAGAAATCTTGTGAGATTGTTGGGTTGCTGCTTTGAGAAAGAAGAAAGGATGCTAGTCTATGAATACCTTCCAAACAAAAGTTTGGACTTCTTTATATTTGATGAAACACAAAGATCAATACTAAATTGGGATCAACGATTTGAAATTATATTTGGAATTGCTAGAGGAATATTGTATCTTCATCAAGATTCAAGACTAAAAATAATTCATAGAGATCTAAAAGCTAGTAATATTCTACTCGATGCTACAATGAATCCAAAGATTTCAGACTTCGGAATGGCTAAAATATTTGGTGAAGACCAAATTCAAGCAAGAACAAGAAGAGTAGTTGGAACATATGGTTACATGTCACCAGAATATGCAATGGAAGGACAATATTCAACAAAATCAGATGTTTTTAGTTTTGGAGTCTTACTATTGGAAATTGTGGCTGGCAAGAGGAACACGGACCATGATCATGGAAGATCCTCCCCAAATTTGATTGGATATGTGTGGATACTGTGGACAGAAGGAAAGGCATTGGATATAGTAGATTCATCACTTGGCCAATCTTATCCTTGTGCTACAGTTTTGAGGTGCATTCAAGTTGGACTATTGTGCGTGCAAGAAAATGTGAACAATAGACCTTCCATGTCAGAAGTTATTGTGATGCTAGGAAATGAAGCACCCATTCGCCAACCCCAAAAACCAGCGTTTTTATTCAATGACAGCCGAGAGCCAGAGCAAGAGCCATCAGCAGCAATAATGGAAGATGGATCTTTATCAGTAAACGGAATAACAACAACAAGTACAATCTTTGGACGATAA 2532 0.425 MSYSFFLLLLLLYPPCCNSLDTITPHQPLNDGDVLLSKDRGAFALGFFSPANSKSRYLGIWFNNISQQTVVWVANRDTPLNTTSGVLSINNHGNLVLHDHNNSFLKPVWSSHVSVSTMSTNASAKLLDTGNFVLIQSSNNSDKVLWQSFDYPGNTYLPYMKLGFDRKTGLNRSLTSWKSPSDPGTGNATYKMDRTGFLPQLFLYANNAPLMRVGPWTGLRLAGAAEMTQDFIFSFFFIDDSNEVSSIYRVNDPNLLSISLLEETGYLRRLVWQGREGKWFELWNGPREECDHYRRCGSNSICNPYHEETFLCQCLPGFEPKSEREWYLKDGSSGCVRKANVSTCRSGEGFVELELVKAPDTSKASVNLGVSMEECRDMCLRDCSCAAYTSANQSSNSGCITWHGDMEDTRKFSQVGQTLFVRVDALELAKYAKHNGHGSPIGKKKMAAILAVSIFFFLFLVATIVMYWFLKVRKQFGRRRNNKHSSFRIHVEENLQNFDNSKHSDLPLLFDLASITSATERFSPANKLGQGGFGSVYKGCLINGREIAVKRLSKNSGQGTEEFKNEVTLLAKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDETQRSILNWDQRFEIIFGIARGILYLHQDSRLKIIHRDLKASNILLDATMNPKISDFGMAKIFGEDQIQARTRRVVGTYGYMSPEYAMEGQYSTKSDVFSFGVLLLEIVAGKRNTDHDHGRSSPNLIGYVWILWTEGKALDIVDSSLGQSYPCATVLRCIQVGLLCVQENVNNRPSMSEVIVMLGNEAPIRQPQKPAFLFNDSREPEQEPSAAIMEDGSLSVNGITTTSTIFGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90662g00023 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Stsc90662g00023 843 Gene3D - 17 149 IPR036426 -
Stsc90662g00023 843 Pfam Protein tyrosine and serine/threonine kinase 526 791 IPR001245 GO:0004672|GO:0006468
Stsc90662g00023 843 SMART ntp_6 345 423 IPR003609 -
Stsc90662g00023 843 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Stsc90662g00023 843 ProSiteProfiles EGF-like domain profile. 286 323 IPR000742 -
Stsc90662g00023 843 CDD EGF_CA 289 322 - -
Stsc90662g00023 843 Pfam PAN-like domain 344 408 IPR003609 -
Stsc90662g00023 843 Gene3D Phosphorylase Kinase; domain 1 496 597 - -
Stsc90662g00023 843 SMART serkin_6 522 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00023 843 PIRSF SRK 1 840 IPR024171 GO:0004674
Stsc90662g00023 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 486 597 - -
Stsc90662g00023 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 149 - -
Stsc90662g00023 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 183 IPR036426 -
Stsc90662g00023 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 785 - -
Stsc90662g00023 843 CDD PAN_AP_plant 342 423 - -
Stsc90662g00023 843 SUPERFAMILY Protein kinase-like (PK-like) 505 800 IPR011009 -
Stsc90662g00023 843 Gene3D Transferase(Phosphotransferase) domain 1 598 804 - -
Stsc90662g00023 843 CDD STKc_IRAK 528 793 - -
Stsc90662g00023 843 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Stsc90662g00023 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
Stsc90662g00023 843 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Stsc90662g00023 843 SMART blect_4 26 152 IPR001480 -
Stsc90662g00023 843 ProSiteProfiles Protein kinase domain profile. 522 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00023 843 CDD B_lectin 27 152 IPR001480 -
Stsc90662g00023 843 ProSiteProfiles Bulb-type lectin domain profile. 20 147 IPR001480 -
Stsc90662g00023 843 Pfam D-mannose binding lectin 69 178 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90662g00023 Stsc-Chr90662 134802 146785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90662g00023 442 822 Receptor kinase-like Gene Family AT4G05200 51.421 1.33e-127 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90662g00023 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90662g00023 - - ahf:112791364 1471.83