Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90662g00022 ATGCTAATAATCATTTTCTTCCCTTGTTACCACACACTTGATACCGTAACCATAACACCAAACCAACCCCTTAAAGACGGCGACGTTCTTCTCTCCCAAGACAGAGCAACCTTCGCACTCGGTTTCTTCAGCCCTGCAAATTCCACAACCCGCTATGTTGGTATTTGGTACAACAGAATCTCACAACAAACCGTAGTTTGGGTTGCCAACAGAGACGCTCCCCTTAACAACACTTCAGGTGTTCTCTCCATCAACAACCACGGAAACCTCGTCCTCCACCACCACAACGCTACCTCCCCGGATCTTAACCCTCTTTGGTCCTCAAACGTCTCTCTCTCCTCTACCAACACTTCAGCCAAGCTTCTCGACACCGGAAACTTGATTCTAATCCAAACAGGAAGAAGCAGCAACGGTTTTGTTGTGTGGCAGAGTTTTGATTATCCCGGTAACACACTTCTTCCCTTCATGAAACTCGGCTTGGACCGGAAAACAGGGTTGAACCGGTTCCTCACATCATGGAAGTCCCAATCCGACCCGGGAACCGGGAACTTCACTTACCGGATCGACCTGACCGGGTTCGCCCAGCTATTCCTGTACAAGAACAAGGCTCCTGTGTGGCGAGTCGGGTCATGGACGGGTCAAAGATGGAGCGGAGTGCCCGAGATGACTCCGAACTTTATCTTCAACGTTAGCTTTATTAGCGACACAAAGGAAGTTAGCATAGTGTACGGAGTGAAGGACCCGAACGTGCTGTCGAGGATGGTGCTGGATGAGACGGGTCACGTGAGTAGGATGACGTGGCAGGCTCACGAGCAAAGGTGGTTCGAATTCTGGTACGCGCCCAAGGAGCAGTGTGATAACTACAGGCAGTGCGGGTCAAACACGAACTGTGACCCGTATGAGGAGGACAAGTTCATGTGCGAGTGCCTGCCAGGGTTCGAACCCAGGTTCCAGAGAGAGTGGTACCTTAGAGATGGGTCGGGTGGGTGCGTGCCTGACACTTCGAAGGCGCGTGTGGACCCGGGAATGAGTATGAAGGATTGTAGGGTGAAGTGTTTGGAAGATTGCTCGTGTGCGGCGTATACGACTGCCAATGAGACTTCTGAGACTGGCTGCGTTACGTGGCATGCTGACATGGAGGACACTAGGACCTACACACAAGTCGGCCAAAATTTGTTCGTACGTGTCGATAAAATTGAATTAGCTAAATATGCGAAAAAACGCTATGGTTCTGTTGGCAAGAAGGGAATGTTAGCAATTTTGGCAGTTTCAGTTTTCTTATTCTTGTTTCTAGTGGTCACGTTGGGCTATTGGTTTGTGAATGCCAAGAAACAAGGGAAAAGAAGGGATCGCAAGTATTCATTTCGTCTTACTTTTGAGGACTCCACCAATCTACAAGAATTTGATAGCACGCAAAACTCAGATTTACCATTCTTTGATCTAAGCTCTATAGCTGCTGCAACAGATAATTTCTCCCCTGACAATAAACTTGGTCAAGGTGGATTTGGTTCTGTATATAAGGGGCTATTAAATAATGGAAAGGAAATTGCTGTGAAGAGATTGTCTAAATATTCCGGACAGGGCATAGATGAATTTAAAAATGAGGTTGTTTTAATTTCAAAGCTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGCTGCGTTCAAGGAGAGGAGAAGATGTTAATTTATGAGTACTTGCCAAACAAAAGCTTAGACTCTTTCATTTTTGATCAATCTAAAAGGTCATTGCTAAACTGGAAAAAAAGATTCGAGATCATATGTGGAATTGCCAGAGGAATGTTATATCTTCACCAAGATTCACGTTTAAGAATCATTCATAGAGATTTAAAGACCAGCAATGTTTTGTTGGATTCTGAAATGAATCCTAAAATAGCAGATTTTGGAATGGCAAGAATATTTGGTGGAGATCAAATTGAAGCTAATACTAATCGTGTTGTTGGAACCTATGGATATATGTCACCCGAATATGCCATGGAAGGACAATTTTCATTTAAGTCGGATGTATATAGTTTTGGAGTTTTGCTTCTAGAAATCATTACCGGCAGAAAGAATAGTGGCCAATATGATGACATTACAACGACAAATTTAGTTGGGCATATATGGGATCTGTGGAAAGATGGGCGAGCGATGGAGATTGTCGATGAGTGTTTATTAGAAGAGTCATGGTGTGACGGCGAAGTTGAAAGATGCATCCAAATTGGGCTTCTATGCGTGCAAGACTATGCCACAGACAGGCCATCAATGGCAGCAGTTTTATCCATGCTGGGAAATGACTCAGCTCTTCCTTCTCCAAAGCACCCAGCATTTATTTTCAAGAGGAGAACTAATTTTGACGGTTCATCAGATCCATCAACTAGTGAAGGAGTTCACTCAGTAAACGACGTTAGTATGACTATGGTTGAAGCTCGCTAG 2436 0.447 MLIIIFFPCYHTLDTVTITPNQPLKDGDVLLSQDRATFALGFFSPANSTTRYVGIWYNRISQQTVVWVANRDAPLNNTSGVLSINNHGNLVLHHHNATSPDLNPLWSSNVSLSSTNTSAKLLDTGNLILIQTGRSSNGFVVWQSFDYPGNTLLPFMKLGLDRKTGLNRFLTSWKSQSDPGTGNFTYRIDLTGFAQLFLYKNKAPVWRVGSWTGQRWSGVPEMTPNFIFNVSFISDTKEVSIVYGVKDPNVLSRMVLDETGHVSRMTWQAHEQRWFEFWYAPKEQCDNYRQCGSNTNCDPYEEDKFMCECLPGFEPRFQREWYLRDGSGGCVPDTSKARVDPGMSMKDCRVKCLEDCSCAAYTTANETSETGCVTWHADMEDTRTYTQVGQNLFVRVDKIELAKYAKKRYGSVGKKGMLAILAVSVFLFLFLVVTLGYWFVNAKKQGKRRDRKYSFRLTFEDSTNLQEFDSTQNSDLPFFDLSSIAAATDNFSPDNKLGQGGFGSVYKGLLNNGKEIAVKRLSKYSGQGIDEFKNEVVLISKLQHRNLVRILGCCVQGEEKMLIYEYLPNKSLDSFIFDQSKRSLLNWKKRFEIICGIARGMLYLHQDSRLRIIHRDLKTSNVLLDSEMNPKIADFGMARIFGGDQIEANTNRVVGTYGYMSPEYAMEGQFSFKSDVYSFGVLLLEIITGRKNSGQYDDITTTNLVGHIWDLWKDGRAMEIVDECLLEESWCDGEVERCIQIGLLCVQDYATDRPSMAAVLSMLGNDSALPSPKHPAFIFKRRTNFDGSSDPSTSEGVHSVNDVSMTMVEAR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90662g00022 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Stsc90662g00022 811 ProSiteProfiles Bulb-type lectin domain profile. 15 142 IPR001480 -
Stsc90662g00022 811 SMART blect_4 21 148 IPR001480 -
Stsc90662g00022 811 Gene3D Transferase(Phosphotransferase) domain 1 567 770 - -
Stsc90662g00022 811 CDD STKc_IRAK 497 763 - -
Stsc90662g00022 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 755 - -
Stsc90662g00022 811 Pfam Protein tyrosine and serine/threonine kinase 494 761 IPR001245 GO:0004672|GO:0006468
Stsc90662g00022 811 Pfam PAN-like domain 331 381 IPR003609 -
Stsc90662g00022 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 179 IPR036426 -
Stsc90662g00022 811 ProSiteProfiles Protein kinase domain profile. 491 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00022 811 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Stsc90662g00022 811 CDD B_lectin 21 148 IPR001480 -
Stsc90662g00022 811 ProSiteProfiles PAN/Apple domain profile. 309 397 IPR003609 -
Stsc90662g00022 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Stsc90662g00022 811 Gene3D - 10 145 IPR036426 -
Stsc90662g00022 811 SMART serkin_6 491 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00022 811 Gene3D Phosphorylase Kinase; domain 1 453 566 - -
Stsc90662g00022 811 CDD PAN_AP_plant 331 396 - -
Stsc90662g00022 811 Pfam D-mannose binding lectin 64 174 IPR001480 -
Stsc90662g00022 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 457 566 - -
Stsc90662g00022 811 SUPERFAMILY Protein kinase-like (PK-like) 472 763 IPR011009 -
Stsc90662g00022 811 Pfam Domain of unknown function (DUF3403) 765 811 IPR021820 GO:0004674
Stsc90662g00022 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 771 - -
Stsc90662g00022 811 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Stsc90662g00022 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 11 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90662g00022 Stsc-Chr90662 129426 133621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90662g00022 451 811 Receptor kinase-like Gene Family AT4G11530 55.738 4.19e-128 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc90662g00022 PK_Tyr_Ser-Thr 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90662g00022 - - gmx:100812814 1276.15