Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90662g00009 ATGGCTTCTCGAAACCAGAACAGGCCTCCTCGCAGCCCCTCCCACAAGAAGGTGGGTTCAGAAGAATTATTCTCAGATAAGCGTCGAAGAATCGGAGCTGACAAGATGGATAGACAAGGAGCCACAGGAAGCAGGACAAGGACCCCGTTTTCAGCCGTTAACAACCGCACGGATGCCACAAGTGATGCCGGAACCGCCGAGCCGTCTGAGTGTGGCACCATTGAGTTCACGAAGGAGGATGTAGAGGCGTTGTTGAATGAGAAGATGAAGAAGGGGAATCCTTATGATAACAAGAAAAAGATGGAGCAGATGGCGGATCTGATAAAGAAGCTTAAACTTTGTGTTCGCTGGTTTAAGAAAATTGAAGAAGGAGATTCCCAAGAAAAGCAAAGGCTTGGTTCTGAACTAGAGGCAGCTCAGAAGAAGTGCAATGATACTGAGGTTGATATGAAGAATATGATGGAGGAATTGAACAAAAGAATATCTGATTTAGAAGAGAAACTTGCAAAAGAAGAATCAGATAAGTTGGAAGCCAATAACCGTTACAGAGAAGAAAAGGAAGCAAGGAATGCAGCTGAGGAAGTTTGTAAAGTGAAGTCAGCTGAGCTAGAGAGGATTCGGGACGAGAAATCAGCTGCAGAGCGAAAGGCTATTTCAAATGAGGACTTGTACAAACGATCACAAGAGTACAATATGAGTCTGCAGCAGTACAATAGACGTCTTCAGTCAGATCTTGAAACAGCAAACGAGGCAAATAAAAGACTTGAAACAGAGAAAGCGACCATTGTTGAAAGCCTTAGCCATGTTAGAGGTCACAATAAAGTCCTGCAGGAGCAGTTGGCGTCTCTTAAAGTTTCACAGAGTGAAGCTCTACACGAGAAAGAAATATCTACAAACGAACTAAAACGTCTTCGTGAGGAGTTAAAACAAATCAGAGATGACCGTGATTGTCAACAGAAGCAAGTAAAGGATTTAATAGCAGAAGTAGCAAAGTACAAAGAATTTACTGGGGAATCATGTGCAAAATTGGATTCCTTGACAGTTAAAACAAATGCTATTGAGGAGACTTGTTCTTCTCAAAGGGAGCAAATATTAATACTGGAGCAGCAGTTGAAAGCTGAAAGGGAGAAGTTAAAGATGGCTGATATGTCTGCATCAGAAACAAGAACAGTGTTTGAAGAGCAGAAAAGAATCATACATGAGCTTCAGGATAAATTAGCAGATAAAGAATTTCAAATAGTTGAAGGAGAGAAGCTGAGGAAAAAACTGCACAACACCATTCTGGAGCTAAAAGGAAATATTCGTGTGTTCTGCCGTGTACGACCTTTGCTACCAGATGATGGCACAGGAACTGATATGGTCGTTTCTTACCCTACGTCAACAGAAGCACTTGGTCGGGGAATTGAATTGGTTCAAAACGGGCAGAAGTACCCTTTTACATTTGACAAAGTGTTTAATCACGACGCTTCACAGAATGACGTGTTCCTAGAGATATCCCAGCTAGTGCAGAGTGCACTAGATGGATACAAGGTGTGTATCTTTGCGTATGGGCAAACAGGTTCAGGCAAAACTTATACAATGATGGGCAGGCCTGATGCGCCAGATTTGAAAGGGTTGATACCACGTTCTCTAGAACAGATATTCCAGATTAGTCAAACTCTGAAAGATCAGGGTTGGAAGTACAAAATGCAGGCATCAATCTTGGAAATTTATAATGAGACCATCAGGGATTTGTTATCAAATAGGTCAAGTGGGATCGACCAGACACGATCAGAGAATGGTGTTCCTGGCAAGCAGTACACTATTAAACATGATGCAAACGGAAACACGCACGTTTCGGATCTAACCATTGTGGATGTTTGTAGTGTGAATGAGATTTCCTCCCTCCTAAAACAGGCTGCGCAATGCAGGTCTGTTGGGAGGACACAGATGAATGAGCAATCATCCAGAAGTCATTTTGTCTTTACTTTGCGTATATGTGGGATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACNNNNNNNNNNTTGATCTTGCTGGAAGTGAAAGACTATCAAGGAGTGGGGCAACTGGGGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCATCTTTGAGTGATGTAATATTCGCTTTGGCAAAGAAAGAGGAGCATGTTCCTTTCAGGAATTCAAAACTTACATACCTTCTTCAGCCATGCCTTGGTGGTGATTCCAAAACATTGATGTTTGTCAACATCGCACCCGATCAATCATCAACCAACGAGTCGCTTTGCTCGCTACGTTTCGCAGCCAGAGTCAATGCCTGTGAAATCGGGGTTCCAAGGCGTCAAACTCAGGCAGCCACACGGTCCTCAGATTCCCGGTTGAGCTATGGCTAA 2394 0.4286 MASRNQNRPPRSPSHKKVGSEELFSDKRRRIGADKMDRQGATGSRTRTPFSAVNNRTDATSDAGTAEPSECGTIEFTKEDVEALLNEKMKKGNPYDNKKKMEQMADLIKKLKLCVRWFKKIEEGDSQEKQRLGSELEAAQKKCNDTEVDMKNMMEELNKRISDLEEKLAKEESDKLEANNRYREEKEARNAAEEVCKVKSAELERIRDEKSAAERKAISNEDLYKRSQEYNMSLQQYNRRLQSDLETANEANKRLETEKATIVESLSHVRGHNKVLQEQLASLKVSQSEALHEKEISTNELKRLREELKQIRDDRDCQQKQVKDLIAEVAKYKEFTGESCAKLDSLTVKTNAIEETCSSQREQILILEQQLKAEREKLKMADMSASETRTVFEEQKRIIHELQDKLADKEFQIVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGTGTDMVVSYPTSTEALGRGIELVQNGQKYPFTFDKVFNHDASQNDVFLEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQISQTLKDQGWKYKMQASILEIYNETIRDLLSNRSSGIDQTRSENGVPGKQYTIKHDANGNTHVSDLTIVDVCSVNEISSLLKQAAQCRSVGRTQMNEQSSRSHFVFTLRICGINENTEQQVQGVLNXXXXDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNIAPDQSSTNESLCSLRFAARVNACEIGVPRRQTQAATRSSDSRLSYG 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90662g00009 797 ProSiteProfiles Kinesin motor domain profile. 433 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90662g00009 797 PANTHER KINESIN-LIKE PROTEIN KLP-3 144 781 IPR027640 GO:0003777|GO:0007018
Stsc90662g00009 797 MobiDBLite consensus disorder prediction 1 74 - -
Stsc90662g00009 797 MobiDBLite consensus disorder prediction 14 36 - -
Stsc90662g00009 797 Pfam Kinesin motor domain 439 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90662g00009 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 772 IPR027417 -
Stsc90662g00009 797 Coils Coil 129 216 - -
Stsc90662g00009 797 Coils Coil 220 265 - -
Stsc90662g00009 797 PRINTS Kinesin heavy chain signature 508 529 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90662g00009 797 PRINTS Kinesin heavy chain signature 675 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90662g00009 797 PRINTS Kinesin heavy chain signature 642 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90662g00009 797 PRINTS Kinesin heavy chain signature 724 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90662g00009 797 Coils Coil 357 377 - -
Stsc90662g00009 797 Gene3D Kinesin motor domain 371 776 IPR036961 -
Stsc90662g00009 797 SMART kinesin_4 431 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90662g00009 797 CDD KISc_C_terminal 431 776 - -
Stsc90662g00009 797 FunFam Kinesin-like protein 379 776 - -
Stsc90662g00009 797 Coils Coil 287 328 - -
Stsc90662g00009 797 Coils Coil 392 412 - -
Stsc90662g00009 797 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90662g00009 Stsc-Chr90662 39971 45156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90662g00009 342 771 Calmodulin-binding Proteins AT5G65930 37.500 3.69e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90662g00009 K10405 - gmx:100818473 1161.75