Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90662g00007 ATGAGTATTATTCTCATGTACATCATCCAAACCTTGTTGTGTTTCTTGCTCACTGTTTTCACACCAGGCCATGCTACTGACACAGATATATTCTGTTTGAAATCCATCAAGGAATCCTTGGAAGATCCATATAACTACTTAGCTTCAAGCTGGAACTTCGACAACAAAACCGAAGGTTTCATTTGTAGATTTAATGGTGTTGACTGCTGGCATCCCGATGAAAACAGAGTGCTTAATCTGAAACTATCCAACATGGGTCTCAAGGGGGAGTTCCCAAGGGCCCTTCGGAATTGTTCATCTTTGACTGGCTTAGACCTTTCTATAAACCAGTTATGGGGACCCATCCCTTCTGATATATCAAACATACTCACTTATGCTACAGCCCTTGATCTCTCAAGTAACAAGTTCAGCGGAGACATTCCACCATCTTTAGCTAACTGCACTTACCTGAATGCTATAAAGCTTGATCACAACATGCTCAGTGGTAGAATCCCACCAAAATTTTCGGAGCTCGCGAGGCTTAAGACACTGTCTTTGACCAACAATGAGTTGTCAGGGCCAGTGCCCAATTTCAGCTATGGTCAAGTAAGTGCTAGCTATGATAATAATAGAGGGCTTTGTGGAGGACCTTCTTTGCTACCATGTTCTTCACACAAGCATCTCCACTTACACCTGCACCTAACATTTAAGGTTGCCCTCCTTCTTGCTTTCGTTTTATCCTTTGTTTGTGTTGTTGTGTACACCATGTGCTGCCGTTCTTCCTCTAGGACTAGGACACCAATGAAGCCCGCCAAATTCAACCACCAAGATTACACATTCAAATATGTCTGCTCCCTCATAAGGTGGAAGATGCGACCGCTAGTTTATCACATACGCCAATTTCTATCCCTGCACATCCAAAACAATGGAACCCAACAGATAGCGCTGATAATGGAAAGATTGACATCCACTATGAGTTTAGAAGAACTCAATGATGCAACCGAAAGCTTTTCCATTGACAATGCCATAGGGGTGGGCAAAATGGGAATAATGTACGAGGCACTTCTATCTAATGGTTGCCACCTTGCTGTTAAGAGGCTATCCGATCCTCAACTATTTCAGAGACAAGTTCTTTTGGAGATAAGGATTCTTCGTAACATCCAACACACAAACATAGTTCCTCTCCTTGGATTATGTGTTGAGAATAATGAAAGGATTCTGGTGTACCAATATACATCAAATGGAAGACTTTCCAAATGGTTGCATCCTGTGGAATCTGATGAGGCTATGATATTGACATGGCCACAGAGGATCAAGATTGCACTTGGTGTGGCTAGAGCCTTATCTTGGCTTCATCACACTTGCAATTTGCATATTGTGCATCTTAATGTGTCTTCTGAGTGTGTCTTGCTTGATGAGAGTTTTGAACCAAAGCTATCAAATTTTGGAGAGGCTAAGTTCATGAACCCGAATAAACATGATGATATTCCAGGAATGTCGTTTTATGTAGAGGATGGAAAGAAGGATGTTTATGATCTTGGTAGTGTGCTTCTTGAGCTGGTCACTGGAAAAACATTGAATGAATTGATGGTGTGTTTATCTGACAATGCTGACTTCTCTGGTGACCCTTCAATTATTTATGATGCAGTTGATAAGTCCCTTATTGGGAAAGGATTTGAAAATGAAGTGTTTACTCTTATCAAAGTTGCATGTGAGTGTATTCAACCTATTCCAGATAAGAGACCAACAATGGTTCAAGTTTACAACAAGATGAGCAATGTATGGGGAGAGAGGCATGGGTTTATTGATGATTCTGATATGCTTGCTACGAGTGCTAGTGAAATTGTTGAGTTATAA 1836 0.4107 MSIILMYIIQTLLCFLLTVFTPGHATDTDIFCLKSIKESLEDPYNYLASSWNFDNKTEGFICRFNGVDCWHPDENRVLNLKLSNMGLKGEFPRALRNCSSLTGLDLSINQLWGPIPSDISNILTYATALDLSSNKFSGDIPPSLANCTYLNAIKLDHNMLSGRIPPKFSELARLKTLSLTNNELSGPVPNFSYGQVSASYDNNRGLCGGPSLLPCSSHKHLHLHLHLTFKVALLLAFVLSFVCVVVYTMCCRSSSRTRTPMKPAKFNHQDYTFKYVCSLIRWKMRPLVYHIRQFLSLHIQNNGTQQIALIMERLTSTMSLEELNDATESFSIDNAIGVGKMGIMYEALLSNGCHLAVKRLSDPQLFQRQVLLEIRILRNIQHTNIVPLLGLCVENNERILVYQYTSNGRLSKWLHPVESDEAMILTWPQRIKIALGVARALSWLHHTCNLHIVHLNVSSECVLLDESFEPKLSNFGEAKFMNPNKHDDIPGMSFYVEDGKKDVYDLGSVLLELVTGKTLNELMVCLSDNADFSGDPSIIYDAVDKSLIGKGFENEVFTLIKVACECIQPIPDKRPTMVQVYNKMSNVWGERHGFIDDSDMLATSASEIVEL 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90662g00007 611 FunFam Nuclear pore complex protein NUP107 26 190 - -
Stsc90662g00007 611 ProSiteProfiles Protein kinase domain profile. 330 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90662g00007 611 SUPERFAMILY Protein kinase-like (PK-like) 308 582 IPR011009 -
Stsc90662g00007 611 Gene3D Ribonuclease Inhibitor 27 217 IPR032675 -
Stsc90662g00007 611 Gene3D Phosphorylase Kinase; domain 1 291 404 - -
Stsc90662g00007 611 Gene3D Transferase(Phosphotransferase) domain 1 405 599 - -
Stsc90662g00007 611 SUPERFAMILY L domain-like 27 226 - -
Stsc90662g00007 611 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 249 587 - -
Stsc90662g00007 611 Pfam Protein kinase domain 332 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90662g00007 Stsc-Chr90662 30492 32905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90662g00007 5 594 Receptor kinase-like Gene Family AT3G28450 35.275 3.87e-109 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Stsc90662g00007 Pkinase 4.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90662g00007 - - adu:107480601 693.345