Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90661g00025 ATGTTCCCCCCAACATCACCTTCATTTTCTCGCGACACTCACCACCACTTAACGCTCTTAGTTTTCTCCGTTTCGCTCATACTTCTACTTCAACCTCCGTCCTCACTCGCCATTCGTCCCGCTGAGTCGGATCGGATCGAACTCGTCGCCAACTCGACCGAGTCCAATGTCTCGCTCTCCAAACCCCGGGAAGGAAGCTTCGCGGAAATGATCGATCGAGCTCTCGAGCACGAGTTCCCCGAGAACGACCAGAACGAAGTGCCTGATGCGGGGGGCTTCAACAACAGTGTGGCAGAACAACAGGCTGTTCTTGAAACTGTGGCCAGGGTCAAGCCAAAGAAGAACGAGACAAAGGATGAAAAGTCATTTCAACTCCATCATGTATTTAATTTGGATAATGATAATAGAGCTGAAGATACCCCAATGTTGATAGACCGAAAGGATAATGTTTTCATAATATCTAATTTTAAATCCAAGTATCCAGTGCTCCAGCTAGATTTGCGATTGATTTCTGACCTAGTGGTTGCTATAGTATCGGCAACTTGTGGCGGTGTTGCATTTGCTTTTGCTGGACAACCGGTTATTACTGGATATCTACTGGCTGGCTCCATAGTTGGACCTGGTGGCTTTAACTTCATTAGTGAAATGGTGCAGGTGGAAACAGTGGCTCAATTTGGTGTAATATTTCTTCTGTTTGCATTGGGCCTGGAATTCTCGGCAGCTAAGCTTCGTGTTGTTCGAGCAGTTGCTGTTCTAGGAGGGCTACTTCAAATTTTTCTATTTATGTGTATGTGTGGGCTTACTGTGTCGTTATGTGGGGGTAAAGCTTCAGAAGGAGTTTTTGTTGGTGCTTTCCTTTCTATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGACAAGAACACTACTAATGCCCTTCATGGACAAGTCACTATTGGAACCCTTATTTTGCAGGATTGTGCTGTTGGATTGCTTTTTGCATTACTTCCTGTTCTGGGTGGCACATCTGGTGTTTTCCAAGGAGTGCTATCCATGACAAAGCTGTTGGTGACTTTGATTGCATTTCTCTCTGTTCTGTCAATATTGTCTCGTACCTGCCTCCCATGGTTGCTTAAACTGATGATAAGCCTATCATCCCAGACAAATGAGCTCTATCAGCTGGCTTCCGTTGCTTTCTGCTTGCTTGTAGCCTGGAGTAGTGATAAGCTGGGGCTAAGTCTAGAGTTAGGTTCCTTTGCGGCTGGAGTGATGATTGCAACCACTGATCTGGCTCAACATACTCTAGAGCAAATTGAACCTATTCGCAATCTTTTTGCTGCACTTTTCCTAGCCAGTATTGGAATGTTGATTCATGTTCATTTTCTCTGGAACCATGTTGACATTCTGGTGGCATCTGTAATTTTGGTGATTGTCATAAAAACAATCATAATTGCTTCTGTTGTCAAAGGATTTGGTTACAATAACAAGACTTCAGTACTTGTTGGAATGTCGTTGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTGGTTGAGGGTAAACTATATTTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTAACAACTCCCTTACTTTTCAAGCTAATTCCTGCAGTGGTGCATCTCGGTGTGCTATTGAGGTGGTTCTCTCCTGATAGTTCAATGGAGATCGGATATAGTAAGGTAGACATCCTCCGGTCAGAAAGTGGGAAGCAGCGAATAATCTTGATGGACCAAGAATGTCATGATTCTTGA 1782 0.4422 MFPPTSPSFSRDTHHHLTLLVFSVSLILLLQPPSSLAIRPAESDRIELVANSTESNVSLSKPREGSFAEMIDRALEHEFPENDQNEVPDAGGFNNSVAEQQAVLETVARVKPKKNETKDEKSFQLHHVFNLDNDNRAEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFISEMVQVETVAQFGVIFLLFALGLEFSAAKLRVVRAVAVLGGLLQIFLFMCMCGLTVSLCGGKASEGVFVGAFLSMSSTAVVLKFLMDKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSVLSILSRTCLPWLLKLMISLSSQTNELYQLASVAFCLLVAWSSDKLGLSLELGSFAAGVMIATTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSVLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSSMEIGYSKVDILRSESGKQRIILMDQECHDS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90661g00025 593 Pfam Sodium/hydrogen exchanger family 174 543 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc90661g00025 593 Gene3D - 167 550 IPR038770 -
Stsc90661g00025 593 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 27 575 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90661g00025 Stsc-Chr90661 175343 183691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90661g00025 61 593 Antiporters AT5G11800 83.521 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90661g00025 K26735 - gmx:100811030 950.658