Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90661g00018 ATGCCCAAAATGAAGCACCTCCTCCGAAAGCTTCACATCGGTGGCGCCACCACCGCCACCCCTACCACCGCCATCCACCACGTCCCTCCGCCGCCGCCTCCGGTTCTCGCTCCCTCTACTTCTTCCGCTTCCTCTTCCGCTCTCCCCTCGCCCACTCCAATCGTCGTGGATCCAATTCCAAACCCTAGCACCGCTTCCACCGTCAGCAACGGCGAAAACGGCGTCGTTAGTGATTTCGGCTTGTTGGAGGAAGAGGAGTTTCAGATGCAATTGGCTCTCGCGATCAGCGCCTCCGATCCCGATGTCCATAAAGACCCTGAATCTGCGCAGATCGATGCCGCCAAACAGATCAGCCTCGGATATGAAGCTTCTCTTTCTGATACTCAAGGACTCGTTCAGTTTCAGTCCCTTCGTTATTGGAATTATAATGTCATTGGTTATGAGGAGAAAGTGATGGACGGGTTTTATGATGTTTATGGCATCACCTCAAATTTGACTGAACGGGGAAAGATGCCGTTGTTGGTGGATCTGCAAACTACACCCGTCTCAAGAAATCTTGATTGTGAAGTGATTGTGGTGAATCGCACAGTTGACACTCAGCTGAAGCAGCTTGAAGAAAAAGCCTGTGCTTTACTTAATGAGTGTGGTGTTTCTGAACTAGGACTAATCTTGAGTGGCTTACTTCAGAAACTTGCTGATATTGTTGTCAATAAAATGGGTGGACCAGTTGGCAGTGCTGATAAAATCACAAAAAGCTGGGCTGTGAGGAGTCGTGAGCTTCGAGATTCTTTAAGATCTATTGTTCTTCCCCTTGGCAGTCTTGATGTTGGACTTTCACGTCACCGAGCCCTACTTTTCAAGGTACTAGCTGATAGGATTAATATTCCCTGCATGCTGGTCAAAGGGAGCTATTACACAGGAACAGACGATGGAGCAGTGAACTTAATTAAAGCTGATGATGGAAGTGAATACATTATTGATATGATGGAGATTGTAGGGTTACCTAACGGCACACATCCACTGCTTGATGATGGAACTGGAGTGCTGGGAATTCCATCTGATATCGGCAAAATCTCAACCCTGGGGAGGGTCCAGCCAGAAGAACTACTATTAGATATGGGCAGTCAAACAAAACCAGATAAAATACATAACGTTGAAGAAACCGACACTGAAGCGTACAAATGCTCTTCACCTACAGAACCATCTCCTGCGGAAAAGATCCGTGTAAATAATGTCTCCAAGTATGTTCTCAGTGCAGCAAAGAACCCGGAATTTGCTCAAAAGTTGCACACAGTTCTGTTAGAGAGTGGTGCATTACCTCCTTCTGATCTTTTTTCAGATATGAATCTTCAGGATATGGGTGAGCATAGAGTAAATGGAAAAAATGTTGTTGATGCTGTTCAAGCAGATCCAAATGGATTGTTATTAAGCTATGAGAATTGTCTCACACCCTCTCAAGGGCTAGGCTGTGCCAATAATACTAGGAAATGTAAATCAGCTGATCGGATAGTTGGACAGCAAAAAGAATTGCAAACAGATGCCATTAGATTTTATAACTCTTTACAGGGTGATAACGCAAGGAAGGGGCTTGTAACTGCTTCTGGCAGGATTAATGGTTTTGAGCTATCTAATTCATTAATTGATTCAGTTGCTGTCAATCCCCATAAGATGTATAAAGAAAATTTTGTTGAATCTTCTGAGCCCAAAGCCGCTGTTAATGGGTTTGACGACTTTGGTGATGATGAAGAAAATAGTTTTCCAAATAAGGTTGAAGCATCTTGTAACAACATTGTTCGGGGGACAGATTCATCTCAAACAAATGAGATGGTCAATGGAGGTGGTATCCGACATGATGGTAACAGCAATCAAGTTAATTCTGTACTTGGTGAAGGAACAGAATGGGAAATTCAATGGGAGGATCTTTCTGTTGGTGAGCGCATTGGTATTGGTTCTTATGGTGAAGTTTACCGTGCTGATTGTAATGGAACTGAAGTTGCAGTGAAGAAGTTTCTTGACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGGCTGCGGCACCCTAATGTTGTACTCTTCATGGGAGCAATTACTCGCTCTCCACATTTCTCAATCTTAACAGAGTTTCTCCCCAGAGGCAGCTTGTACAGGCTATTACATCGGCCCAACGTTCGAATTGATGAGAAGAGGCGGTTGCGTATGGCTCTTGATGTGGCTAAAGGAATGAATTACTTGCATACAAGCAATCCTCCCATTGTCCATCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAGCATTGGGTTGTTAAGGTTTGTGATTTTGGTCTGTCACGGATGAAGCACCATACCTTTTTGTCATCAAAGTCCTGTGCAGGAACGCCTGAGTGGATGGCTCCAGAAGTTCTAAGAAACGAACCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGCGTAATCTTGTGGGAGTTGGCTACCATGATGATTCCCTGGAAAGGTTTGAACCCTATGCAGGTTGTCGGAGCTGTTGGATTTCAAAATAAACGCCTTGAAATTCCAGACAATGTCAATCCTGCAGTCGCGCAAATAATACGTGATTGCTGGCAAATGGAGCCACATTTGCGGCCATCATTTGCCCAGCTGATGTCTCGTCTCTCCCGTCTTCAACATCTGGTTGCTGGAATAGCGAGCTCCACACAGTAA 2727 0.4455 MPKMKHLLRKLHIGGATTATPTTAIHHVPPPPPPVLAPSTSSASSSALPSPTPIVVDPIPNPSTASTVSNGENGVVSDFGLLEEEEFQMQLALAISASDPDVHKDPESAQIDAAKQISLGYEASLSDTQGLVQFQSLRYWNYNVIGYEEKVMDGFYDVYGITSNLTERGKMPLLVDLQTTPVSRNLDCEVIVVNRTVDTQLKQLEEKACALLNECGVSELGLILSGLLQKLADIVVNKMGGPVGSADKITKSWAVRSRELRDSLRSIVLPLGSLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMEIVGLPNGTHPLLDDGTGVLGIPSDIGKISTLGRVQPEELLLDMGSQTKPDKIHNVEETDTEAYKCSSPTEPSPAEKIRVNNVSKYVLSAAKNPEFAQKLHTVLLESGALPPSDLFSDMNLQDMGEHRVNGKNVVDAVQADPNGLLLSYENCLTPSQGLGCANNTRKCKSADRIVGQQKELQTDAIRFYNSLQGDNARKGLVTASGRINGFELSNSLIDSVAVNPHKMYKENFVESSEPKAAVNGFDDFGDDEENSFPNKVEASCNNIVRGTDSSQTNEMVNGGGIRHDGNSNQVNSVLGEGTEWEIQWEDLSVGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRSPHFSILTEFLPRGSLYRLLHRPNVRIDEKRRLRMALDVAKGMNYLHTSNPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATMMIPWKGLNPMQVVGAVGFQNKRLEIPDNVNPAVAQIIRDCWQMEPHLRPSFAQLMSRLSRLQHLVAGIASSTQ 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90661g00018 908 Pfam Ethylene-responsive protein kinase Le-CTR1 133 330 - -
Stsc90661g00018 908 Pfam Protein tyrosine and serine/threonine kinase 642 893 IPR001245 GO:0004672|GO:0006468
Stsc90661g00018 908 MobiDBLite consensus disorder prediction 21 50 - -
Stsc90661g00018 908 SUPERFAMILY Protein kinase-like (PK-like) 630 892 IPR011009 -
Stsc90661g00018 908 Gene3D Transferase(Phosphotransferase) domain 1 720 902 - -
Stsc90661g00018 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 760 772 IPR008271 GO:0004672|GO:0006468
Stsc90661g00018 908 ProSiteProfiles Protein kinase domain profile. 641 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90661g00018 908 PRINTS Tyrosine kinase catalytic domain signature 820 842 IPR001245 GO:0004672|GO:0006468
Stsc90661g00018 908 PRINTS Tyrosine kinase catalytic domain signature 864 886 IPR001245 GO:0004672|GO:0006468
Stsc90661g00018 908 PRINTS Tyrosine kinase catalytic domain signature 715 728 IPR001245 GO:0004672|GO:0006468
Stsc90661g00018 908 PRINTS Tyrosine kinase catalytic domain signature 754 772 IPR001245 GO:0004672|GO:0006468
Stsc90661g00018 908 PRINTS Tyrosine kinase catalytic domain signature 801 811 IPR001245 GO:0004672|GO:0006468
Stsc90661g00018 908 CDD STKc_MAP3K-like 647 893 - -
Stsc90661g00018 908 FunFam Serine/threonine-protein kinase isoform 1 632 719 - -
Stsc90661g00018 908 Gene3D Phosphorylase Kinase; domain 1 634 718 - -
Stsc90661g00018 908 ProSitePatterns Protein kinases ATP-binding region signature. 647 669 IPR017441 GO:0005524
Stsc90661g00018 908 SMART serkin_6 641 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90661g00018 908 FunFam Serine/threonine-protein kinase CTR1 720 902 - -
Stsc90661g00018 908 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 178 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90661g00018 Stsc-Chr90661 123979 131870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90661g00018 541 899 MAP Kinase Kinase Kinase AT5G11850 69.252 3.36e-171 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc90661g00018 PK_Tyr_Ser-Thr 5.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90661g00018 K04424 - gmx:100779137 1222.61