Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90660g00016 | ATGTTATCCCTTTGTTCATATTTGGTACCCGTTCTACTGCTGCTGGGGTTCTTCTTAAGTGTTTTCAATATTACTTATGACATCCGGAGTTTGATTACCAACGCAGATAAAAGAACGTGTTCATGTGGGTTGTGTGGGAGGCATGAAATAAGGCACCCTTTGAGGCTGAATAATACTAGTCCAACACCAACCAACTGTGGTGACCACAGGTACACCCTCTCTTGTGAGAATGATAATCAACTCTTTCTCTATCTCAACTCAATCAAGTTTGAAGTGCAGTCGATTAACTACAACAACAACACTATCCGACTAGTAGATGCCAATGTTGCCCTCCATAGGCACCATCACTCTTTTTCCCTTCCTTATTCTTTGACCTCCTCCAATTTCAGCAGAGTGGATCATGAACCATTTCAATATAGCTTGCATACAGGGCAAACTTATGATGTTATTAGATTGACAAAGCAGATGTTATATTTGAGGTGCCCACCATATGGAGTAGAATCTTCTGCTGCTGCAACCTGCATCAATGGCTCTTATGTTCCTGGGAGTACACTCTATGTCAGTGATATTGACAAAACTCTCCAGGAATTGGCAGTGGGAGACTCGTGTGAAATAGAGCGGATGTATCTGACTTCATGGCCTACTGAAATCAAACACAGCAACATTTCATGCACAGCCATCCATCATATGCTGCTCTATGGCTTTGAACTCTCTTGGTTGCAAGCATATTGCAATAATGATGAGGCACACTCAGGCATGATTGGTGGTCATAACAACATCCGCTGTTTTAAAAATCATTACAAGGTCTCTCCACTTCAACCTCAAAACTACCTCCTTTCAATGATTGTTACTTGTCTAATGTATGGAACGATTTTTTTTGTTCTTGGCAAATTTGTACTTGGAGTTCCATGCATCATTATCTTCTGCATATGTAAATCGAGACGAAGACATTTATCGGTATATGACGGTATCGAAGATTTTTTGCGAAGTGATAACAACATTATGCCAATTAGATACTCCTACAAAGACATAAAGAACATGACTAAAAGGTTCAACACTAAACTGGGAAATGGAGGCTACGGCTCTGTCTTTCAAGGAAAACTCCGAAGTGGTCGCTCCGTTGCTGTCAAGTTGTTGAATAAGGATAAATCCAATGGCCAAGAATTCATCAACGAAGTTGCTACTATTGGTAGAATCCACCATGTTAATGTAGTGCAACTTATTGGTTTCTGCATAGAAGGATCAAAACGTGCTCTCTTATATGAATTAATGGAAAATGGCTCTTTAGAAAAATACATATTTTTCCCTAAAGAGAATGCTTCATTAAATTGTGAAAAGCTCTACACCATTTCTCTTGGAATTGCTCGTGGTATTGAATACTTGCATAATGGGTGTGACATGAAGATTCTGCACTTTGACATCAAGCCTCACAACATTCTTTTGGATGACAACTTCAATCCAAAAGTCTCTGATTTTGGACTTGCAAGGCTCTATCCCACTGATGCCAGCATTGTGTCTCTTACTGCGGCAAGAGGAACCATAGGGTACATGGCTCCTGAGCTCTTCTATAGAAACATTGGCGCAATCTCATACAAAGCCGATGTTTATAGCTTTGGGAAGTTGTTTGATGGAAATGGCCAGCAGAAGGAAGAACTGGAATGCCTTGACTGA | 1671 | 0.4034 | MLSLCSYLVPVLLLLGFFLSVFNITYDIRSLITNADKRTCSCGLCGRHEIRHPLRLNNTSPTPTNCGDHRYTLSCENDNQLFLYLNSIKFEVQSINYNNNTIRLVDANVALHRHHHSFSLPYSLTSSNFSRVDHEPFQYSLHTGQTYDVIRLTKQMLYLRCPPYGVESSAAATCINGSYVPGSTLYVSDIDKTLQELAVGDSCEIERMYLTSWPTEIKHSNISCTAIHHMLLYGFELSWLQAYCNNDEAHSGMIGGHNNIRCFKNHYKVSPLQPQNYLLSMIVTCLMYGTIFFVLGKFVLGVPCIIIFCICKSRRRHLSVYDGIEDFLRSDNNIMPIRYSYKDIKNMTKRFNTKLGNGGYGSVFQGKLRSGRSVAVKLLNKDKSNGQEFINEVATIGRIHHVNVVQLIGFCIEGSKRALLYELMENGSLEKYIFFPKENASLNCEKLYTISLGIARGIEYLHNGCDMKILHFDIKPHNILLDDNFNPKVSDFGLARLYPTDASIVSLTAARGTIGYMAPELFYRNIGAISYKADVYSFGKLFDGNGQQKEELECLD | 556 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90660g00016 | 556 | SUPERFAMILY | Protein kinase-like (PK-like) | 332 | 541 | IPR011009 | - | |
Stsc90660g00016 | 556 | ProSitePatterns | Protein kinases ATP-binding region signature. | 355 | 377 | IPR017441 | GO:0005524 | |
Stsc90660g00016 | 556 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 469 | 481 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc90660g00016 | 556 | FunFam | serine/threonine-protein kinase PBS1-like | 324 | 423 | - | - | |
Stsc90660g00016 | 556 | Pfam | Protein kinase domain | 352 | 540 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc90660g00016 | 556 | FunFam | Os07g0541700 protein | 424 | 513 | - | - | |
Stsc90660g00016 | 556 | SMART | serkin_6 | 349 | 555 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc90660g00016 | 556 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 323 | 541 | IPR045874 | GO:0004672 | |
Stsc90660g00016 | 556 | Pfam | Wall-associated receptor kinase galacturonan-binding | 44 | 106 | IPR025287 | GO:0030247 | |
Stsc90660g00016 | 556 | Gene3D | Phosphorylase Kinase; domain 1 | 328 | 423 | - | - | |
Stsc90660g00016 | 556 | Gene3D | Transferase(Phosphotransferase) domain 1 | 424 | 542 | - | - | |
Stsc90660g00016 | 556 | ProSiteProfiles | Protein kinase domain profile. | 349 | 556 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90660g00016 | Stsc-Chr90660 | 120847 | 123289 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90660g00016 | 20 | 553 | Receptor kinase-like Gene Family | AT5G38260 | 34.539 | 2.12e-79 | 260 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Stsc90660g00016 | Pkinase | 4e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90660g00016 | - | - | aip:107607706 | 786.949 |