Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90658g00024 ATGGAGAGGCTCGCGGCGCACTTTACCGACGCCCTCCAATCCCTGGTAGAAGGCGCCTGTGGGGGTGCGCATAGCGCCACAAAGCACCATCATCTCCTTCAAAGTGGGGACCACCATCAAACAGAAATAATAACGGCCTTCCAGCTCCTCCAAGATATGTCCCCTTACGTTAAGTTTGCTCACTTCACAGCTAACCAGGCCATCCTCGAGGCCGTAGCCAACGAGAGGAGGGTCCACATCGTTGATTACGACGTGGCAGAAGGGACTCAGTGGGCCTCCCTTATGCAGGCCTTTGCCTCTAGCAAGGAAGGCTCACCGAGCCCACATCTACGGATCACCGCATTGTCACGAGGTGGAAACAGCGGACGCAGATCCATCGCCACCGTTCAAGAAACCGGTCGGCGATTGGTAGCGTTTGCTGCTTCCCTCGGACAACCGTTTTCTTTTCATCACTGTAGGTTAGACCCTGACGAAATCTTTCGTCCGTCATCTCTCAAACTGGTTCGTGGAGAGGCTTTGGTGTTCAACTGCATGCTGCACCTGCCACACCTAAGTTACCGGGCCCCAGACTCAGTCACCTCGTTCTTGAACGGCGCGAAGGCGTTGGGTCCGAAGCTAGTGACGGTGGTGGAGGAAGAGGTGGGACCCATTGGTGGGGAAGCGGGGTTTGTAGGGAGGTTCATGGAGTCATTGCAGCACTACTCGGCTGTGTATGATTCGCTGGAGGAGGGATTTCCCATGCATAGTCGGCCCCGGGCGCTGGTGGAGAGGGTTTTCTTGGGGCCGAGAATAGCGGGGTCGTTGGGGAGGCTGTACTGGAGGGGTGGGGATGAAGAGAGAGGGTCGTGGGGGGAGTGGTTGCGTGCGGAGGGGTTCACCGGAGTTCCAATAAGCTTTTCTAACCACTGCCAAGCTAAGCTGTTGGTTAGTCTGTTTAACGATGGGTATAGAGTGGAGGAATTTAGTAACAATAAATTGGTGTTGGGTTGGAAATCAAGGCGTTTGCTTTCAGCTTCTATTTGGAATTATTCTATTATTCCAGAACCTTATTTTTAG 1056 0.5388 MERLAAHFTDALQSLVEGACGGAHSATKHHHLLQSGDHHQTEIITAFQLLQDMSPYVKFAHFTANQAILEAVANERRVHIVDYDVAEGTQWASLMQAFASSKEGSPSPHLRITALSRGGNSGRRSIATVQETGRRLVAFAASLGQPFSFHHCRLDPDEIFRPSSLKLVRGEALVFNCMLHLPHLSYRAPDSVTSFLNGAKALGPKLVTVVEEEVGPIGGEAGFVGRFMESLQHYSAVYDSLEEGFPMHSRPRALVERVFLGPRIAGSLGRLYWRGGDEERGSWGEWLRAEGFTGVPISFSNHCQAKLLVSLFNDGYRVEEFSNNKLVLGWKSRRLLSASIWNYSIIPEPYF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90658g00024 351 ProSiteProfiles GRAS family profile. 1 342 IPR005202 -
Stsc90658g00024 351 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 338 IPR005202 -
Stsc90658g00024 351 Pfam GRAS domain family 1 341 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90658g00024 Stsc-Chr90658 168406 169461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90658g00024 2 342 GRAS Transcription Factor Family AT3G54220 36.047 1.10e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc90658g00024 GRAS 4.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90658g00024 - - gmx:100787926 526.554