Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90655g00001 GGGGGGCACAACATAGGAAAGATCGGCTGCGAATTCATTCAGGAAAGACTCTACAACTTCCAAGGTACTGGCCAAGCAGACCCCACTATACCTGTCGATTTCCTAAATCAGATGAAGCTAAACTGCCCAGAAAACGACACTATCCTTGATGCTTCAACATTTGAAGTTTCAAAGCTGGAAAGTAATCATTCGGATGTACGGAAGTCATACATGCAAGCATTGTCAACTTCAATACCATCCGGAGCAGCATTTGACACTCACTATTACGAAAGCTTGTTGAAGGGAAGGGGGCTGCTCTTTGCCGACCAGCAGCTGATGTCTCATGCGAAGACTGCAAGATTGGTATCTGCTTATGCTTCAGATGACGGATCAACCTTTCGCATGGATTTTGCCAGGGTTATGTTGAAAATGTCTAATCTTGATGTTCTAACTGGACTTCAGGGTCAGGTTCGCCTTAATTGCTCGCAACCTGTAAGTTCTTAA 483 0.4472 GGHNIGKIGCEFIQERLYNFQGTGQADPTIPVDFLNQMKLNCPENDTILDASTFEVSKLESNHSDVRKSYMQALSTSIPSGAAFDTHYYESLLKGRGLLFADQQLMSHAKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRLNCSQPVSS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90655g00001 160 PANTHER PEROXIDASE 25-RELATED 1 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90655g00001 160 Pfam Peroxidase 1 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90655g00001 160 Gene3D Peroxidase, domain 2 1 137 - -
Stsc90655g00001 160 ProSiteProfiles Plant heme peroxidase family profile. 1 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90655g00001 160 SUPERFAMILY Heme-dependent peroxidases 1 156 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90655g00001 Stsc-Chr90655 121 844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90655g00001 1 156 Peroxidase AT4G33870 37.278 2.96e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90655g00001 K00430 - gmx:100804973 245.743