Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90654g00027 ATGGATGAGTCAAATAAGGATAAGGCCATCAGAGCCAAAGAAACTTCTGAGAAAATGTTTGGTGCAGGTGATGTTGATTCTGCAATGAGGTTTGCTTGTCAGGCTCGAAATTTGTTGCCTGATCTTGAGGGTATTGAGCTCATGATAAAAATATATGCTATACACATGGCTGCTAAGAATAAAGTAGATGGTGAAATTCATTGGTACAATATGCTTGGTGTGGCTGCTCAAGATGATGTTGGCACAATGAGGGAAGCGTATATGAGTTTAGCTTCCCTGCTTCGCTCGGACGGTGACAAGTATGTTGGTGCAGATGGGGCTTTTGAACTTGCTTCGCAGGCGTGGAGTGTGCTGTCGGATGAGGCTAAGAGGGCAGCCTTCGACGAGAAGATTAACGCGCCGGCATTCAATGAGGAGGCTAAGGCAGCAACATGTAAGCTTGCAACTGAGTGTGAATATCCACCATCACAAGAGGGGGCTAATTGTGATCACAATGTTACTAAGTCTGCCGCTTCAAATGCAAAGATCCAGAAGGAAAATTCGTCTAAAACATCAAGATCAAGTACATTTTGGACTATCTGCCCTAGGTGCAAGGTTCTGTTCCTGTACCCTAGAGTTAATGTTAATTATATACTTTTGTGTGTCGTTTGCAATGAAGCATTTATAGCAGTAGAAGTAGATAAACGGAAGATTTTAGCAACAAGGAGGCGTTCCAGGGTTTTGCATGGTATCAATCTGCAGGCACATGATGTAGGAAACCTTCGTCGGAGGACATTACCGAGAAAAACTAGTCAGTTTTCCTCTGCAACTCAAGCAAAAGATGATCAAAAGATGTATCAGAAAGTAAAGCGAAAGCGCAATGAGGAGCAGGTTACAAAGAGGGAAAATGCCTTACAAGAGGAGCACCCTGTTGCTAAAAAAGGTTACTTCAATCCTGCTAAGATAAGAAGTGCCTTGGAGGATATGAGCTTGACTTGCTATGGCGAGCGAAACACAAATGAGACAAATTCTGAATATAATGAGATAAGTCGAGCTAAAGAGAGCTGCATTGGAAAAGGCATCTACCAGGCTGAGCTTCATAACCATCTTATGGACATTGCTGTAAATGCGCTTAGTGCGAAACTAGCAGAACTTAATCCGGATTCTAAAGATAGCGAGACAGGGGAAACATTTTTAAAGGAATCTGATAATTGTGATCAAGATAATTGTGAGAAGGCAGAAGAAGAAAGAACAAGTGTACCTCAAGCAACCATGCCATCTGCAGGCTCTAATACTACAACTGACATGCTAACAAAATCTTTGGGGAAGATGTCAATAGAGTTTCCAACTTCCAAATGA 1338 0.4215 MDESNKDKAIRAKETSEKMFGAGDVDSAMRFACQARNLLPDLEGIELMIKIYAIHMAAKNKVDGEIHWYNMLGVAAQDDVGTMREAYMSLASLLRSDGDKYVGADGAFELASQAWSVLSDEAKRAAFDEKINAPAFNEEAKAATCKLATECEYPPSQEGANCDHNVTKSAASNAKIQKENSSKTSRSSTFWTICPRCKVLFLYPRVNVNYILLCVVCNEAFIAVEVDKRKILATRRRSRVLHGINLQAHDVGNLRRRTLPRKTSQFSSATQAKDDQKMYQKVKRKRNEEQVTKRENALQEEHPVAKKGYFNPAKIRSALEDMSLTCYGERNTNETNSEYNEISRAKESCIGKGIYQAELHNHLMDIAVNALSAKLAELNPDSKDSETGETFLKESDNCDQDNCEKAEEERTSVPQATMPSAGSNTTTDMLTKSLGKMSIEFPTSK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90654g00027 445 Gene3D DnaJ domain 66 133 IPR036869 -
Stsc90654g00027 445 MobiDBLite consensus disorder prediction 380 445 - -
Stsc90654g00027 445 MobiDBLite consensus disorder prediction 413 445 - -
Stsc90654g00027 445 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Stsc90654g00027 445 MobiDBLite consensus disorder prediction 283 305 - -
Stsc90654g00027 445 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Stsc90654g00027 445 SUPERFAMILY Chaperone J-domain 58 131 IPR036869 -
Stsc90654g00027 445 PANTHER BNAC03G44070D PROTEIN 1 405 - -
Stsc90654g00027 445 Pfam DnaJ domain 68 128 IPR001623 -
Stsc90654g00027 445 MobiDBLite consensus disorder prediction 283 302 - -
Stsc90654g00027 445 MobiDBLite consensus disorder prediction 380 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90654g00027 Stsc-Chr90654 196543 198521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90654g00027 2 232 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 25.316 1.68e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90654g00027 - - aip:107619213 598.586