Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90654g00026 ATGGACTTCTGGCAAGAAATTCATGCAACAAGCTGGGGAAAGGAGTTTGTAGCAGGAGGGCTTGGAGGGATTACTGGATTAGTATCTGGTCATCCATTAGACACAGTTAGAATAAGGCAACAGACCTTAAGCACCGCCGGCGGCGGCGGCGGCTCATCGTCGGCATTCGCCATCCTTAGAAACGCTCTGGCTAGGGAAGGACCTGCTTCTCTCTACCGTGGCATGGGTGCACCTTTGGCCACTGTTGCATTTCAAAATGCCATGGTTTTTCAAACTAATGCAATTCTTTCAAGGGCATTTGACAAGCCTGTTTCTCCTAAAGACCCTCCTTCCTTAAAGGCTGTAGCATTAGGAGGAACTGGCACAGGTGTCCTACAGAGCCTAATGATTTCCCCGGTCGAGATGATCAAGATTCGCCTTCAGCTCGGCCGCAACCAGAAACACCTGACAGAACAACAACCATACAAAGGTCCTATAATGGTTGCCAAGAATGTATGGAGAAAAGAGGGAATTAGAGGGATCTACAGAGGACTAGGCATCACTGTGTTAAGGGATGGACCTTCACATGGTGTGTATTTCTGGACTTATGAATACATGAGGGAACTGCTTCACCCAGGTTGCAAAAAAAGTGGTGAAGAAAACCTGAGTACTATGTTGGTGGCAGGTGGATTAGCTGGTGTAGCAAGCTGGATTGTGTGCTACCCTTTTGATGTTGCAAAGACAAAGTTACAAGCTCAAACATATGATTGTTTGAAATACAATGGCACTGTTGATTGCCTCAGAAAGAGCATTAAGGAAGAAGGGTATGATGTTCTATGGCGTGGGTTGGGAACCACTGTTGCTAGAGCTTTTGTAGTGCATGCTGTTGTTTTTTCAGCTTATGAGATCACATTGAGGTTATTATTTAATCAAAGTATTCAAATGCAGGAAGTTGATTAG 939 0.4526 MDFWQEIHATSWGKEFVAGGLGGITGLVSGHPLDTVRIRQQTLSTAGGGGGSSSAFAILRNALAREGPASLYRGMGAPLATVAFQNAMVFQTNAILSRAFDKPVSPKDPPSLKAVALGGTGTGVLQSLMISPVEMIKIRLQLGRNQKHLTEQQPYKGPIMVAKNVWRKEGIRGIYRGLGITVLRDGPSHGVYFWTYEYMRELLHPGCKKSGEENLSTMLVAGGLAGVASWIVCYPFDVAKTKLQAQTYDCLKYNGTVDCLRKSIKEEGYDVLWRGLGTTVARAFVVHAVVFSAYEITLRLLFNQSIQMQEVD 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90654g00026 312 Gene3D Mitochondrial carrier domain 2 115 IPR023395 -
Stsc90654g00026 312 SUPERFAMILY Mitochondrial carrier 11 295 IPR023395 -
Stsc90654g00026 312 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Stsc90654g00026 312 PRINTS Mitochondrial carrier protein signature 125 143 IPR002067 GO:0055085
Stsc90654g00026 312 PRINTS Mitochondrial carrier protein signature 175 193 IPR002067 GO:0055085
Stsc90654g00026 312 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Stsc90654g00026 312 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Stsc90654g00026 312 Pfam Mitochondrial carrier protein 215 304 IPR018108 -
Stsc90654g00026 312 Pfam Mitochondrial carrier protein 116 204 IPR018108 -
Stsc90654g00026 312 Pfam Mitochondrial carrier protein 10 101 IPR018108 -
Stsc90654g00026 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 300 IPR018108 -
Stsc90654g00026 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 202 IPR018108 -
Stsc90654g00026 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 99 IPR018108 -
Stsc90654g00026 312 Gene3D Mitochondrial carrier domain 116 310 IPR023395 -
Stsc90654g00026 312 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90654g00026 Stsc-Chr90654 193852 194790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90654g00026 1 305 Antiporters AT1G79900 63.934 1.83e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90654g00026 K15109 - gmx:100812056 429.098