Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90654g00019 ATGGCAGTTATTAGGGTGAAAAGGTGGCAACCAGAACTAGTGGCTCCGGCCACACCCACTCCCCATGAAGTTAAACTGCTATCAGACATAGATGATCAAGAAGGGCTACGTATCCATGTTCGTAACATATACATATATTGTCACAGTCCCTCAATGGAAGGAAAAGACCCTGTAAAGGTGATAAGAGATGCACTCTCAAGAACACTTGTCTTTTACTACCCATTTGCCGGCAGGCTTAGGGAGGGTCATGGCCGCAAGTTGATGGTGGATTGCACTGCAGAGGGTGTTCTGTTCATTGAGGCTGATGCTGACGTCACACTTGATCAACTTGGTCAAGCTCTTCAAACCCCGTTCCCTTTCTGTGAGGAATTGCTTTACAATGTTCCTGGCTCGGATGGAATTGTCGGTTGTCCCCTCTTGCTCATACAGGTGACACGCTTTAAGTGCGGTGGTTTTACTTTTGCCATAAGAATGAACCACACTATGTGTGATGGAGCTGGTTTTGCACAATTTATGAGTGCTTTGGCTGAAATGGCTCGTGGTGCTCATCAACCATCGGTTCTACCAATATGGCAAAGGGAGCTTTTGAGTGCAAGAAACCCACCGCGCATCACATGCAACCATCCTGAATTTGAGAAACCAAAAGACATTGCAGAATGGCAGACCATCATTGGCAGCATTGAAAACATGATTGAACGATTTTTCTTCTTTGGACCCAGTGACATAGCTTCTCTTGGTAACTTAGTTCGAGATCAGCTTGGTGAAGCTAAATATAGCACATTTGAGCTCATCACAGCATATTCCAATTGGTTATTATGGAAACGTTACGGCATTTCCCGTGGCAGTACCGTGGAGAAGCTTTGTGAAAATCCAATTACATATGCTGTTGAGTTGATTAAAAAAGCCATAGCGGAGGTAAAAGAAGAATATATGCATTCTTTGGCAGATTTATTGGTGATTAATGGACGACCTTTCTATACACTACCATGGTCTTTCCTTGCGACAAAGTTGTGGCGTATGGGGTATAGAAAAATGGATTTTGGGTGGGGCAATTTAGTGTATGGTGGGTTAACCGGGACTGACAATGTGTTCGCAGACTTGAGTCTAATGGATTATGTGAATCCAAATGGAGAAGAAGGTATTTTACTTCCAATTTTATTGCCTGCCAAAGCTATGGAGAGGTTTGCAAAAGAACTGGATGATATGCTTGGGAACCCAAATCAAGCTATCAAGAGTGGTAACAAATCCCAACACAATTCTCAAGTCTAG 1269 0.4342 MAVIRVKRWQPELVAPATPTPHEVKLLSDIDDQEGLRIHVRNIYIYCHSPSMEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGRKLMVDCTAEGVLFIEADADVTLDQLGQALQTPFPFCEELLYNVPGSDGIVGCPLLLIQVTRFKCGGFTFAIRMNHTMCDGAGFAQFMSALAEMARGAHQPSVLPIWQRELLSARNPPRITCNHPEFEKPKDIAEWQTIIGSIENMIERFFFFGPSDIASLGNLVRDQLGEAKYSTFELITAYSNWLLWKRYGISRGSTVEKLCENPITYAVELIKKAIAEVKEEYMHSLADLLVINGRPFYTLPWSFLATKLWRMGYRKMDFGWGNLVYGGLTGTDNVFADLSLMDYVNPNGEEGILLPILLPAKAMERFAKELDDMLGNPNQAIKSGNKSQHNSQV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90654g00019 422 Gene3D - 3 213 IPR023213 -
Stsc90654g00019 422 Gene3D - 276 399 IPR023213 -
Stsc90654g00019 422 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 400 - -
Stsc90654g00019 422 Pfam Transferase family 9 275 - -
Stsc90654g00019 422 Pfam Transferase family 281 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90654g00019 Stsc-Chr90654 163344 166866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90654g00019 13 399 Monolignol Biosynthesis Gene Families AT5G48930 26.267 1.21e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90654g00019 K19861 - gmx:100787907 447.588