Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90654g00005 ATGGAGGTGGGTGCATGTCCATCATGCTCTGGTGATTCTGATGAGCAACAAGAGAAGCAACGTTCTTCTTCTTGTGAGGAAGCCATCAACAAGAAGAAGAGAAAGAGGGAAGAAAAGAAGAAGAAAACGGCACCATCATCATGGGGATACTCAACTGAATTGATGATGCATGATGATCCATGGAAGCTGAAAAAGGTTCTGAACGAGAGTGACGTGGGCAACATGAGTAGGCTGTTGCTTCCCAAGGACATGGCGGAGAAGCTGGTGGTGGAGGCGGTTGGTTACAACCACCACAATGAAAAGGAAGGCGTCAAGATTGACATATGTGACGTGGACACACACTCAATGCACACTCTTGTGTTCAAGAGATGGGGCTCTTCTAGAAGCTACGTCTTCATTGGCAACTGGGTCAGAGATTTTGTTTCAAGAAGGTCTCTCAAGTCCGGCGATGAGGTTGGCTTTCACTGGGATCCCTATGCTCGCCGCTTCCACTTCTCTGTTCTCTATACTGGCTTCTTGAACTCTTGTAAAAATTTATCAAGAACAGGAGCAGTGAAACCTGATGAGGTTGTGAAGTTAGAAGATGAAGGTGTAAGAGAAAGAGCCTCTCATGTAGTGAAACCTGCTGCTATCACTGATTCATCATGGCTGCCTGATACAGGAGCCTCTCATCAAGGAAACCAAGGAGATTCTGCTCCAAGGAACACCTAA 711 0.4641 MEVGACPSCSGDSDEQQEKQRSSSCEEAINKKKRKREEKKKKTAPSSWGYSTELMMHDDPWKLKKVLNESDVGNMSRLLLPKDMAEKLVVEAVGYNHHNEKEGVKIDICDVDTHSMHTLVFKRWGSSRSYVFIGNWVRDFVSRRSLKSGDEVGFHWDPYARRFHFSVLYTGFLNSCKNLSRTGAVKPDEVVKLEDEGVRERASHVVKPAAITDSSWLPDTGASHQGNQGDSAPRNT 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90654g00005 236 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 23 170 - -
Stsc90654g00005 236 CDD B3_DNA 61 168 IPR003340 GO:0003677
Stsc90654g00005 236 MobiDBLite consensus disorder prediction 1 47 - -
Stsc90654g00005 236 MobiDBLite consensus disorder prediction 209 236 - -
Stsc90654g00005 236 SUPERFAMILY DNA-binding pseudobarrel domain 58 168 IPR015300 -
Stsc90654g00005 236 MobiDBLite consensus disorder prediction 216 236 - -
Stsc90654g00005 236 Gene3D - 57 167 IPR015300 -
Stsc90654g00005 236 MobiDBLite consensus disorder prediction 14 33 - -
Stsc90654g00005 236 SMART B3_2 63 171 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90654g00005 Stsc-Chr90654 55180 56248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90654g00005 46 155 RAV Transcription Factor Family AT4G01500 32.727 4.56e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90654g00005 - - adu:107466106 206.838