Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90653g00029 ATGGGTAATGTTGATTATTCATCATACCCTTCACCTATGAATAATGAGGGTGAACAACATCCTCGTGTGGCTGTTCCACCTCCACAACCATTTTTCAAGTCTCTCAAATACTCATTGAAGGAGACATTCTTCCCCGACGATCCGTTGAGGAGGTTCAAGAACCAACCGCCTTCGAGGAGGTTGATTCTTGGACTCCAGTACTTCTTCCCGATATTCGAGTGGGGTCCGAATTATACTTTTCAGTTCTTGAAATCTGATCTTATTGCCGGAATCACCATTGCTAGCTTGGCCATACCTCAAGGAATCAGCTATGCTAAGCTTGCAAACTTGCCTCCAATTCTTGGACTATATTCAAGTTTCATACCACCATTGATTTATGCAATGATGGGAAGCTCAAGGGACTTAGCTGTGGGAACTGTGGCAGTTGGATCTCTTCTTTTGGGTTCAATGTTGTCAACTGAAGTTAATCCAACTCAGAATCCAAAGCTTTTTCTCCACCTTGCTTTCACTGCTACTTTCTTTGCTGGAATTTTCCAAGCTTCATTGGGTCTCTTCAG 557 0.4309 MGNVDYSSYPSPMNNEGEQHPRVAVPPPQPFFKSLKYSLKETFFPDDPLRRFKNQPPSRRLILGLQYFFPIFEWGPNYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLLGSMLSTEVNPTQNPKLFLHLAFTATFFAGIFQASLGLF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90653g00029 185 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Stsc90653g00029 185 MobiDBLite consensus disorder prediction 1 15 - -
Stsc90653g00029 185 MobiDBLite consensus disorder prediction 1 23 - -
Stsc90653g00029 185 PANTHER SULFATE TRANSPORTER 30 185 IPR001902 GO:0016020|GO:0055085
Stsc90653g00029 185 Pfam Sulfate permease family 83 185 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90653g00029 Stsc-Chr90653 206799 208072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90653g00029 14 185 Inorganic Solute Cotransporters AT4G02700 64.740 6.02e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90653g00029 K17471 - gmx:100810196 298.516