Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90653g00028 ATGAGTGGTGGTTTCAAAGTGAAATTGGGTAAAGGTGGCTTTGGTGCCGTGTACAACGAAAAACTTCGCAGTGGTTCTGATGTAACAATAAAGATGTTGAACCAATCCAATGCTAATGGCCATGACTTCATCAACGAAGTTGCTAGAATTGGAAGAATACACCATGTTAATGTGGAAGGGACCGTGCCTTTAAGTTATGAGAAATGTATGAAATATCTCTCGAGGTGGCTTGTTGCGTATTTGCATCAAGGTTGTGATATGCAAATTCTACATTTTGATATCAAGCCGTATAATATTCTTCTGGATGATAACTTCGTTTCTAAGGTATCAGATTTCGGACTTACAAAGCTGTATCCGGTAGATGATAGCACTATTACTTTGACTGCAGCAAGAGAAACTTTAGGTGATCGTCCTTCAATGAACAAGGTAGTACAGATGCTGGAAGGGAACAACGATGGAAGTCTTGCAATGCCTCCAACGCCTTCTTTCTATTCGAATGAAGCTTCTAGACATGATAAGGAGATAAATTCCGACCAAGCATTGAGCATGGATTCCTCTAGTACTAGTTATCATGGTGAAACCACAACTTACTATTCAATGGAGGATGATGATTAA 615 0.3951 MSGGFKVKLGKGGFGAVYNEKLRSGSDVTIKMLNQSNANGHDFINEVARIGRIHHVNVEGTVPLSYEKCMKYLSRWLVAYLHQGCDMQILHFDIKPYNILLDDNFVSKVSDFGLTKLYPVDDSTITLTAARETLGDRPSMNKVVQMLEGNNDGSLAMPPTPSFYSNEASRHDKEINSDQALSMDSSSTSYHGETTTYYSMEDDD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90653g00028 204 Gene3D Transferase(Phosphotransferase) domain 1 76 147 - -
Stsc90653g00028 204 SUPERFAMILY Protein kinase-like (PK-like) 8 128 IPR011009 -
Stsc90653g00028 204 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90653g00028 204 SMART serkin_6 3 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90653g00028 204 MobiDBLite consensus disorder prediction 150 204 - -
Stsc90653g00028 204 PANTHER RUST RESISTANCE KINASE LR10-RELATED 78 135 IPR045874 GO:0004672
Stsc90653g00028 204 MobiDBLite consensus disorder prediction 179 196 - -
Stsc90653g00028 204 Gene3D Phosphorylase Kinase; domain 1 2 74 - -
Stsc90653g00028 204 Pfam Protein kinase domain 78 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90653g00028 204 ProSitePatterns Serine/Threonine protein kinases active-site signature. 89 101 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90653g00028 Stsc-Chr90653 184735 185642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90653g00028 1 135 Receptor kinase-like Gene Family AT5G38280 40.237 8.60e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc90653g00028 Pkinase 1.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90653g00028 - - qsu:111993654 164.851