Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90653g00027 ATGCTTTTGATCTTGTTGGCCTTTGCAATGTACCATATTTATCGGTACTTTAAGGCAAAAGGAGAAGACAAAGATAGGATAGAAAAATTCTTGGAGGATTACAGGGCCATGAAGCCTACAAGATTCACCTACCAAGATATTAAGAGGATCACAAATGGTTTTAAGGAAAGCTTAGGCGAAGGAGCACACGGAGCTGTGTTCAAAGGAATGCTCTCCAAAGAAATTCTTGTTGCCGTGAAGATACTCAATGATACACAGGGTGATGGTAAAGAATTCATAAATGAAGTGGCAACTATGGGAAAGATTCATCATGTTAATGTTGTTCGCTTGCTCGGATTCTGCGCCGACGGATTCCACCGTGCTCTTGTCTACGATTTATTTCCGAATGGTTCGTTGCAGAAATTCTTGGCTCCGCCGGATAACAGAGATGTTTTCCTTGGTTGGGTGAAGCTACAAAGAATTGCTCTTGGTGTTGCAAAAGGCCTTGAGTATCTTCATCTTGGTTGTGATCATAGGATACTCCATTTTGACATAAATCCCCACAATGTGTTACTTGATGATCACTTCACTCCAAAAATTACTGATTTTGGACTTGCCAAGTTGTGTCCGAAGAATCAAAGCACAGTGTCCATAACCGCGGCAAGGGGGACACTAGGCTACATTGCCCCTGAGGTATTCTCAAGAAACTTCGGTAACGTGTCGTACAAGTCTGATATTTATAGCTTCGGAATGTTGCTACTTGAGATGGTTGGAGGAAGAAAGAACACAGATGTGTCTGGTGAGGAAATTTTCCAAGTTTTGTACCCTGAATGGATCCATAATATGCTTGAAGGAAAAGACATCCACATCGATATCGACAAAGAGGAAGACATGAAAATTGCAAAGAAACTTGCCATTGCAGGACTGTGGTGCATCCAATGGAATCCTGTAGATCGTCCATCCATGAAAACTGTAGTTCAAATGCTTGAAGGCGAAGGAGATAAATTAATGGTTCCCCCTACTCCATTTGACTCAACTACCAGCTCAAGTAGAAATAATAATAATGCAGTTATTCCATCAAGATACCTAAAATTTGAGCTTGAGGCTATTCCTGAATTAGAGTGA 1104 0.4112 MLLILLAFAMYHIYRYFKAKGEDKDRIEKFLEDYRAMKPTRFTYQDIKRITNGFKESLGEGAHGAVFKGMLSKEILVAVKILNDTQGDGKEFINEVATMGKIHHVNVVRLLGFCADGFHRALVYDLFPNGSLQKFLAPPDNRDVFLGWVKLQRIALGVAKGLEYLHLGCDHRILHFDINPHNVLLDDHFTPKITDFGLAKLCPKNQSTVSITAARGTLGYIAPEVFSRNFGNVSYKSDIYSFGMLLLEMVGGRKNTDVSGEEIFQVLYPEWIHNMLEGKDIHIDIDKEEDMKIAKKLAIAGLWCIQWNPVDRPSMKTVVQMLEGEGDKLMVPPTPFDSTTSSSRNNNNAVIPSRYLKFELEAIPELE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90653g00027 367 FunFam serine/threonine-protein kinase PBS1-like 20 126 - -
Stsc90653g00027 367 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 342 IPR045874 GO:0004672
Stsc90653g00027 367 ProSiteProfiles Protein kinase domain profile. 52 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90653g00027 367 FunFam PR5-like receptor kinase 127 333 - -
Stsc90653g00027 367 Gene3D Phosphorylase Kinase; domain 1 25 126 - -
Stsc90653g00027 367 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Stsc90653g00027 367 SUPERFAMILY Protein kinase-like (PK-like) 30 323 IPR011009 -
Stsc90653g00027 367 Gene3D Transferase(Phosphotransferase) domain 1 127 330 - -
Stsc90653g00027 367 Pfam Protein kinase domain 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90653g00027 Stsc-Chr90653 177760 180801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90653g00027 17 335 Receptor kinase-like Gene Family AT1G66980 50.765 2.08e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc90653g00027 Pkinase 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90653g00027 - - gmx:100819302 593.964