Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90653g00005 ATGAGCAACAATGACAATAGTAGAAACTACAGCTCAAACACCAATGATTGTCAGGATGCTTCCACCAACTATACGCTGTACATTTTGAAACGTATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGCCTGAGGGAGAAATATTTTGGAGAAATTTTTTTAAATGCCTCCTCGAGCTTTGAAGATCTGCTATCAGCTGAAAAACCAAACTGTCTCCTGGAAACATCACAATTTGTGTTTGAGAACACATTTTCAAACAAATTTCGATTGAAAAGTGCTGTATATGAAGAAGGCTTGGACCATATTGCCAGATATGTGGAGTCTTTTGAATCTCAGTCCAATGAAATTTGGCTTGTATTCAGTTTTGAAGGCGTATCATTGTCTAAACTTCTGTATACTGTGGAAGATGCATATGATACTGCTGAGAAAGAAAAGACTGAGCAAGTAAAACATGTCCAAATACTCCATCCATCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAGCTGTTAATGGCACTGAAATCTTGTCATGATCGCAATATTACACACAGGGACATTAAACCTGAAAATATGGTGATATGCTTTGAAGATCAGGAGACTGGAAGATGCTTGAAAGATATACCGACTACAGTAAATAGTTTCTCCACCAAAATGCGTGTTATAGACTTTGGAAGTGGAATTGATGAATTCACATTGAAGCATCTATATGGTTCAACTGGGCCTTCTAGCCTGTGCTTCTTCAGAGCTGAACAAACTTATGAGTATACACCTCCTGAAGCTTTGCTAAATGCTACGTGGTATCAAGGGCCAACAAGCTCAACTCTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACGCCAAATGTTTTCCAGATCGATGCTTTAACACAAACTCTTTTGGACCAGCATCTTGACGGCTGGAATGAGGGTGTGAAGGAGCTGGCTTACAAACTCAGATCATTCATGGAATTGTGTATCTTAATCCCTGAGATGTCCAGAAGTTCCTCAAAGAAGTATCGCACAGCGAACCAGGCTGGTGTTTCACCCGCATCTTGGAAATGCTCGGAAGAATTCTTTTCTCATCAAATAAAGAGTCGAGATCCTCTCAAAATAGGTTTTTCAAATATCTGGGCTTTGCGGTTAGTGCGCCATCTGTTACAGTGGGACCCGGAGGACCGGATAAGCGTTGATGAGGCATTACAGCATCCCTATTTCCAACCTCCCCCAAGAGGGTGA 1296 0.4136 MSNNDNSRNYSSNTNDCQDASTNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASSSFEDLLSAEKPNCLLETSQFVFENTFSNKFRLKSAVYEEGLDHIARYVESFESQSNEIWLVFSFEGVSLSKLLYTVEDAYDTAEKEKTEQVKHVQILHPSKWWHWLKTTEEGQEEMRNLIWQLLMALKSCHDRNITHRDIKPENMVICFEDQETGRCLKDIPTTVNSFSTKMRVIDFGSGIDEFTLKHLYGSTGPSSLCFFRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPNVFQIDALTQTLLDQHLDGWNEGVKELAYKLRSFMELCILIPEMSRSSSKKYRTANQAGVSPASWKCSEEFFSHQIKSRDPLKIGFSNIWALRLVRHLLQWDPEDRISVDEALQHPYFQPPPRG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90653g00005 431 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 100 427 - -
Stsc90653g00005 431 SUPERFAMILY Protein kinase-like (PK-like) 99 427 IPR011009 -
Stsc90653g00005 431 Pfam Protein kinase domain 168 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90653g00005 431 FunFam uncharacterized protein LOC106771884 isoform X8 160 426 - -
Stsc90653g00005 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Stsc90653g00005 431 Gene3D Transferase(Phosphotransferase) domain 1 151 426 - -
Stsc90653g00005 431 ProSiteProfiles Protein kinase domain profile. 39 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90653g00005 431 SMART serkin_6 17 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90653g00005 Stsc-Chr90653 46774 55240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90653g00005 34 429 PP2C-type Phosphatase Gene Family AT3G63340 64.322 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Stsc90653g00005 Pkinase 6.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90653g00005 - - lja:Lj5g3v1003920.1 738.028