Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90653g00004 ATGGTGGTGGATGGACCAGGTGCGGATGGGATCAGGGAGGTTGCAGTGGGTATCGTGGCAGTTTTTGATGGGCACAATGGTGCTGAAGCGAGTGAGATGGCGTCAAAGCTTCTGATGGAGTATTTTGTATTGCACACCTATTTTTTACTTGATGCAGCTTTTTCCGTTATATCAAAAACAAGGGGAACATTGCATCACCGGAGAGAACAGAATCGCTTGAACATGATGCGTAGGTGGAAGGAGATTCTAGGTTTGCATGAGCTGCATTTTGAAAGGTTTCAAAATACATTTTCTGAAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTATTGAGGGCTATCCATGATATTGATACAAAATTTTCTGAGGAAGCCTTCAGAAATAGTCTTCATTCAGGGTCTACGGCAACTATTATATTGGTGGCAGATGATAAGATTTTAGTTGCCAATATTGGAGATTCTAAGGCTTTCTTGTGCTCTGAAAACTTTCAATCTTCTAGAGAGGCCAAAGACTTATTACTGAAGCAATATAGGCAGAAAGAGCTTGATGGTTCTGTTTCTGTGTGGAATCGTGAAAAGTATAAGTTAGCTTCCTCCCATGGACTGACTCATTTTGCTGTAAAAGAATTGACCAGTGATCATCACCCAGACAGAGATGATGAAAGGATTCGGGTGGAAGCAGCTGGTGGACAAGTTATAAATTGGGGGGGAGTGCCTCGTGTAAATGGTCAGCTGGCTATTACACGGGCAATCGGTGATGTATTCTTTAAAAGATATGGTGTTATATCTGCACCAGAAGTGACTGATTGGCAACCTCTGACTGCTAATGATAGCTATTTAGTGGCTGCATCTGATGGTGTTTTTGAGAAGATGAGCATGCAGGAAGTCTGTGATTTGTTATGGGAAGTACACTCTCTCTCTACTGATATGGGATCAGAGTGTGCGCCTTCACCTTCACCTTCATATTCATTAGCTGATTTCATTGTCAACACTGCCTTCAAAAAAGGTAGTAGGGATAATATTGCTGCTGCTGTTGTTCCTCTGGAATCTTCCAAATTTTCTGCAAACTCGCTTATGAGAAGCTATATTGAGAAGAGGGATGCTGATTATCCTCTACTTGCTCTGCAGGAACTTGCTTCAAAAAGTTTAGCTAATGATATCATATCTGATGTAATGCACTTGAACCATCCTCATGCGGTAGATACCAAGTTTAAGCGTATACTGGTTGAAGTGAAACATGGAGATTTTGGATGTTTTTATCTATCTGAAAATCTGGATGAACTTACAGACTCTAAGCAGCCCACCAAAAGAACTGACTGGGAAGATTATTTATATGAACTACCTCAGCCCTTAGCAGATACACATCAACATTCCGTAAGTGGTCCAGTATATTTGTATGATAACCAAAACTTCTGCTTACAACTTGGTCCGACTGTGAATGAATCCAAAGAACAATGCATAAATCCTGAAGCATTTGCAAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACACGATACTGGTTCACATAATGGATCTTCTGGTTATTCAATACCTGAATCAAGGTAA 1581 0.401 MVVDGPGADGIREVAVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDAAFSVISKTRGTLHHRREQNRLNMMRRWKEILGLHELHFERFQNTFSENFDDSFHLEILKEALLRAIHDIDTKFSEEAFRNSLHSGSTATIILVADDKILVANIGDSKAFLCSENFQSSREAKDLLLKQYRQKELDGSVSVWNREKYKLASSHGLTHFAVKELTSDHHPDRDDERIRVEAAGGQVINWGGVPRVNGQLAITRAIGDVFFKRYGVISAPEVTDWQPLTANDSYLVAASDGVFEKMSMQEVCDLLWEVHSLSTDMGSECAPSPSPSYSLADFIVNTAFKKGSRDNIAAAVVPLESSKFSANSLMRSYIEKRDADYPLLALQELASKSLANDIISDVMHLNHPHAVDTKFKRILVEVKHGDFGCFYLSENLDELTDSKQPTKRTDWEDYLYELPQPLADTHQHSVSGPVYLYDNQNFCLQLGPTVNESKEQCINPEAFASFIGLLESIPLHDTGSHNGSSGYSIPESR 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90653g00004 526 SUPERFAMILY PP2C-like 17 353 IPR036457 -
Stsc90653g00004 526 Pfam Protein phosphatase 2C 108 345 IPR001932 -
Stsc90653g00004 526 Gene3D - 8 360 IPR036457 -
Stsc90653g00004 526 ProSiteProfiles PPM-type phosphatase domain profile. 1 352 IPR001932 -
Stsc90653g00004 526 CDD PP2Cc 16 352 IPR001932 -
Stsc90653g00004 526 SMART PP2C_4 5 350 IPR001932 -
Stsc90653g00004 526 PANTHER PROTEIN PHOSPHATASE 16 351 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90653g00004 Stsc-Chr90653 41930 46412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90653g00004 33 355 PP2C-type Phosphatase Gene Family AT3G63320 53.659 3.38e-110 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90653g00004 - - gmx:100781476 834.328