Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90652g00036 ATGGCTCCCAAAACTTGTTTCTTCTTCTTAGCTTTGGTATCCTTTTCATCAGTACTGTGTCTGAGTCCTGCTTTTGCAAAAGATGATGAGCAGGAGAAAGGTGATCCAGGTCTTGTTATGAACTTCTACAAGGAGACATGTCCTCAGGCTGAAGACATCATCAGAGAACAAGTGAAGCTTCTCTACAAGCGCCACAAGAACACTGCATTCTCCTGGCTCAGGAACATTTTCCATGACTGTGCTGTTCAGAGGTGTGATGCATCACTGCTTTTGGACTCCACAAGAAGAACCCTGTCTGAGAAGGAGACTGACAGAAGCTTCGGGCTGAGGAACTTCAGGTACATTGAGACCATCAAGGAAGCTGTAGAGAGAGAGTGCCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTCCTTTCTGCCAGAGATGGCATTGTTTCTCTAGGAGGTCCTTACATCCCTCTAAAAACTGGAAGAAGGGATGGTAGAAGGAGCAGAGCTGAAGTGGTTGAACAGTACCTCCCAGACCACAATGAATCAATTTCTTCCGTTCTTGACAAGTTTGGTGCCATGGGAATCGACACTCCCGGCGTCGTTGCATTACTTGGAGCACATAGCGTTGGGCGAACCCACTGCGTGAAGTTGGTGCACCGTTTGTACCCAGAGGTAGACCCAGTGCTGAACCCAGACCATGTACCTCACATGCTGAAGAAGTGCCCTGACTCCATTCCGGACCCAAAGGCCGTACAGTATGTGAGGAATGACCGTGGTACCCCCATGGTTCTTGACAACAACTACTACAGGAACATCTTGGACAACAAGGGTCTCTTGATTGTGGATCACCAATTGGCTCATGACAAAAGGACCAAGCCTTTTGTGAAGAAAATGGCTAAGAGCCAGGACTATTTCTTCAGGGAATTCTCCAGAGCCATTACCATTCTCTCTGAGAACAACCCTCTCACTGGCACCAAAGGTGAGATTCGAAAGCAGTGCAATGTCGCCAACAAGCTCCGTTCCAACAATGACGAGCCTTAA 1032 0.4797 MAPKTCFFFLALVSFSSVLCLSPAFAKDDEQEKGDPGLVMNFYKETCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQRCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRAEVVEQYLPDHNESISSVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEVDPVLNPDHVPHMLKKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLIVDHQLAHDKRTKPFVKKMAKSQDYFFREFSRAITILSENNPLTGTKGEIRKQCNVANKLRSNNDEP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90652g00036 343 Gene3D - 41 334 - -
Stsc90652g00036 343 PANTHER - 19 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 ProSiteProfiles Plant heme peroxidase family profile. 37 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 FunFam Peroxidase 174 313 - -
Stsc90652g00036 343 FunFam Peroxidase 41 183 - -
Stsc90652g00036 343 Gene3D Peroxidase, domain 2 174 313 - -
Stsc90652g00036 343 SUPERFAMILY Heme-dependent peroxidases 38 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc90652g00036 343 CDD secretory_peroxidase 37 332 IPR033905 GO:0004601|GO:0042744
Stsc90652g00036 343 Pfam Peroxidase 55 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90652g00036 Stsc-Chr90652 205528 207723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90652g00036 13 335 Peroxidase AT4G21960 81.734 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90652g00036 K00430 - qsa:O6P43_031241 590.497