Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90652g00001 | ATGAGTCAACTGGGTGTGATGCTGCAGGAGTCCTTGCGAGCTGAGACGGAAGCAAGGACCATTCTGGGTCTGCTAAGGGACCAGATGGAGGGTGTTGTCCACACAGGACAACGCAGACGGAGAACTCTCAAAGACCGCTTCAGATTCAACGGAATGGGTTGCTGCGGTGCCACCTGGGTTTTCCGTCCCTCTCCCCTCACCCTCACTCACGCTGCACACCAACAACAACAACAAGAAGAAATAGCTGGGGGTGGAGCTGAAGCTGGAGGAGAAACGGATCCGGGTCAAGATCCGACCCCGGATGGACCCGAATGCGAACGGCCCTCTACGGGGATGAATCTGGCGGCAGCATTGGCGGCGGAGCGTGAGTTGCGGGGTTCGCAGGAGGAAGGGGAGAGGGAGGTCGGGGGATCGGAGACGCCGTGGAGAGTGTCTTTGATGCGGCTGCTAGAGGAAACAGAAGGAGGAGGAGGAGAAGGGGAAAGGGAAAGGGAAACGGGTGGGGATAGTGAAGGGGGTGGTGATTGGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGCGCGGCGTTCATACCATGTGGCCACACGTTCTGCAGAGTGTGCTGTCGAGAGGTCTGGCTGAACCGGGGCACCTGCCCGCTTTGTAACCGTTCCATTCTCGAGATTCTCGATATCTTCTGA | 681 | 0.5815 | MSQLGVMLQESLRAETEARTILGLLRDQMEGVVHTGQRRRRTLKDRFRFNGMGCCGATWVFRPSPLTLTHAAHQQQQQEEIAGGGAEAGGETDPGQDPTPDGPECERPSTGMNLAAALAAERELRGSQEEGEREVGGSETPWRVSLMRLLEETEGGGGEGERERETGGDSEGGGDWVCCVCMGRKKGAAFIPCGHTFCRVCCREVWLNRGTCPLCNRSILEILDIF | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90652g00001 | 226 | MobiDBLite | consensus disorder prediction | 152 | 171 | - | - | |
Stsc90652g00001 | 226 | MobiDBLite | consensus disorder prediction | 70 | 109 | - | - | |
Stsc90652g00001 | 226 | CDD | RING-HC | 178 | 215 | - | - | |
Stsc90652g00001 | 226 | Pfam | Zinc finger, C3HC4 type (RING finger) | 177 | 220 | - | - | |
Stsc90652g00001 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 174 | 225 | IPR013083 | - | |
Stsc90652g00001 | 226 | MobiDBLite | consensus disorder prediction | 154 | 170 | - | - | |
Stsc90652g00001 | 226 | PANTHER | OS01G0917900 PROTEIN | 5 | 226 | - | - | |
Stsc90652g00001 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 178 | 216 | IPR001841 | - | |
Stsc90652g00001 | 226 | SMART | ring_2 | 178 | 215 | IPR001841 | - | |
Stsc90652g00001 | 226 | SUPERFAMILY | RING/U-box | 174 | 223 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90652g00001 | Stsc-Chr90652 | 3116 | 3796 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90652g00001 | 21 | 226 | C3H Transcription Factor Family | AT4G22250 | 53.302 | 1.70e-58 | 182 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90652g00001 | - | - | gmx:106799504 | 238.81 |