Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90650g00003 ATGTATCGGTTTTTCAACTTCTTGTGGAGGGTTAAGCGGTTCCTCAACATCGGATCAGAATCAGTACTTAGAAACAGCCTAAGAGTGATCGATGAATTCGTGTATAAATTAATCAGTATCAAGATTGAGCAAGCACAAAGGCTACAAGATGGAACAAATGGAGACATTCTGTCAAGGTTTATAGAACTGAAGGAGACAGATCCAAAGTATCTCAGAGACATTCTCTTGTGTTTTGTTATTGCAGGGAAAGATACATCAGCAGTTGTCCTGTCCTGGTTTCTTTACATGCTGTGCAAGAATCCTCATGTGCAGGAGAAAATTGCACAGGAAATCTCGGAGATAACAAAAGTTAAAAATGGCTCATCCATTGATGAACTTGCTGCTACAATAACTGAAGAAAACTTGGAAAAGATGCACTATCTTCATGCAGCTTTGTCTGAAACACTTAGGCTCTACCCTGCACTTCCAGTGGACGGTAAGGTTTGTTTTTCAGATGACACCTGGCCGGATGGATTCAGTGTCAAGAAAGGTGACATAGTTGGATTCAGTCCATATGTCATGGGAAGGATGAAATACTTGTGGGGTGAAGATGCTGAGAAATTCAGGCCAGAGAGATGGCTTGATCAAAATGGAGTTTTCCAAAAAGAAAGCCCTTTTAAGTTCACAGCCTTTCAGGCTGGTCCTAGAATTTGTCTTGGAAAGGAATTTGCATACAGACAGATGAAGATGGTTTCAGCTGTTCTTTTGGGTAGCCACAGCTTCAAATTAGCAGAACAAAACGAATCAGTAAAATACAGAACCATGATCACTCTACAAATTGATGGTGGCCTACGTTTGTATGCTTTTCAGAGAGAGAAATAA 861 0.4042 MYRFFNFLWRVKRFLNIGSESVLRNSLRVIDEFVYKLISIKIEQAQRLQDGTNGDILSRFIELKETDPKYLRDILLCFVIAGKDTSAVVLSWFLYMLCKNPHVQEKIAQEISEITKVKNGSSIDELAATITEENLEKMHYLHAALSETLRLYPALPVDGKVCFSDDTWPDGFSVKKGDIVGFSPYVMGRMKYLWGEDAEKFRPERWLDQNGVFQKESPFKFTAFQAGPRICLGKEFAYRQMKMVSAVLLGSHSFKLAEQNESVKYRTMITLQIDGGLRLYAFQREK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90650g00003 286 Pfam Cytochrome P450 8 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 Gene3D Cytochrome P450 1 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS P450 superfamily signature 222 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS P450 superfamily signature 81 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS P450 superfamily signature 231 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS P450 superfamily signature 143 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PANTHER CYTOCHROME P450 1 277 - -
Stsc90650g00003 286 SUPERFAMILY Cytochrome P450 3 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS E-class P450 group IV signature 215 231 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS E-class P450 group IV signature 138 154 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS E-class P450 group IV signature 172 186 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS E-class P450 group IV signature 189 207 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS E-class P450 group IV signature 231 249 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90650g00003 286 PRINTS E-class P450 group IV signature 72 98 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90650g00003 Stsc-Chr90650 15750 16937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90650g00003 3 284 Cytochrome P450 AT2G45510 56.055 1.64e-110 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90650g00003 - - pvu:PHAVU_007G063800g 449.514