Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90649g00026 ATGGATTTTAGTGATGACCTTAGATACTTGCCTGAAATGGCTCCTAGATCCGCTAATCAAGCCATATTAGAAGATGGTGGCATGCAGATTCTTTCGAAGGAAGATATGGAGACCTTGGAACACTGCAGAGCCATGTCTAGAAGAGGCGAATGTGCCCCCTTTCTAATTGTTTATGATGCACGTGAAGGCTATACTGTGGTAGCTGATGCTCCAATCAAGGATTTGACATTTATTGCTGAATACACTGGCGATGTGGATTATCTTAAGAATCGAGAAAGTGATGATTGTGACAGTATGATGACCCTTCTTTTATCAAGTGATCATTCTCAAAGTCTTGTCATCTGTGCTGATAAACGTGGAAACATTGCTCGGTTTATTAGTGGCATCAACAATCATACTCCGGAAGGTAAGAAGAAGCAGAACTGTAAATGTGTGAGATACAATGTTAATGGGGAATGCAGGGTCCTTTTGGTTGCTACTCGTGATATTTCTAAGGGCGAGAGGCTTTATTATGATTATAATGGTTATGAGCATGAATACCCCACACATCATTTTGTCTAA 561 0.4046 MDFSDDLRYLPEMAPRSANQAILEDGGMQILSKEDMETLEHCRAMSRRGECAPFLIVYDAREGYTVVADAPIKDLTFIAEYTGDVDYLKNRESDDCDSMMTLLLSSDHSQSLVICADKRGNIARFISGINNHTPEGKKKQNCKCVRYNVNGECRVLLVATRDISKGERLYYDYNGYEHEYPTHHFV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90649g00026 186 CDD SET_ATXR5_6-like 49 186 - -
Stsc90649g00026 186 SUPERFAMILY SET domain 46 174 IPR046341 -
Stsc90649g00026 186 ProSiteProfiles SET domain profile. 52 174 IPR001214 GO:0005515
Stsc90649g00026 186 Pfam SET domain 109 174 IPR001214 GO:0005515
Stsc90649g00026 186 SMART set_7 52 180 IPR001214 GO:0005515
Stsc90649g00026 186 PANTHER N-LYSINE METHYLTRANSFERASE KMT5A 13 184 - -
Stsc90649g00026 186 Gene3D SET domain 1 186 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90649g00026 Stsc-Chr90649 187530 189419 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc90649g00026 SET 3.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90649g00026 K24406 - qsa:O6P43_023354 327.02