Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90649g00019 ATGATGAACAGAAAACCTCATAAACCCCTCCTCCTCCTCATCTCCACCTTCCTCTTCCCATTAACCAGATCCACCATTCTCATCCTCTCCATGGCTTCCCTCTTTTCCATATCCCTCTGCATCTTCTTCACCCTCTTCCTCTCTTCTTCTCACGCTCAACCTTCCCTCGCTATCCTCCAAGCATGCAAGGCCACGCGCTTCCCTCTCATATGCCACACCACCCTCGCTTCTCCAACCCTCACCAACCTTGACCCCTCCCCGGTCGAGCTCGTCCAATCCGCCATTGATTCCTCCTACACCAAGCTCCACGAAGCCATCTCCATGGTCTCCACCCTCTACGACGACTCCCTCGCCTCCAACCGTACACGCGCCACCGCAGCCAAGACCTGCATTCAGATCCTCCGCTACTCACGTCGCCGGACATTCCTCGCCGCCAACGCCATCCCTCGCCATGCCACGAAAGACGCCCGCGCGTGGCTTGGCGCCTCCTTGGCCTACCAGTACGGTTGCTGGTCCAGCCTCAAGTACGCCAACGACACCATCTCCGTCGCCGAAGCGATGGTTTTTGTAGATTCGCTTACCTACATCACCAGCAACGCCCTCAGCATGGTTGCATCCTACGACCTCTTCGGAAACGACACCGCTTCATGGAGGCCGCCGTTGACGGAGCGTAACGGCTTCTGGGAGCCAACGGTTACTGGATCGGGAACTACGTTAGGAGTGCCGTCCAACTTGACCCCGGACGCTACGGTTTGCAAGGACGGTGATGGTTGTTACAGGACCGTGCAGGAGGCGGTTCACTCGGCGCCGGATAACGCTAGGGTCGGAGAAAAGCCGTACGTGATTCACATAAAGGAAGGGGTATATGAGGAGAAGGTTAGGGTTCCACCAAAGAAGAGGAATGTGGTGTTCGTGGGCGATGGAATCGGCAAAACCATCATCACCGGTTCCCGCAGCGTTGGCCTTATGCCCGGGATGACTACCTATAACTCAGCCACCGTCGGGGTTCTTGGGGATGGATTCATGGCCAGGGATCTCACCATCCAGAACACGGCTGGTGCGGATGCGCACCAGGCGGTGGCCTTCCGATCTGACAGTGATCGTTCCGTCATTGAGAATTGTGAGTTCCTTGGCAACCAAGACACTCTCTATGCTCAGTCCCTGCGCCAGTTTTACAAATCGTGCCGCATTGTTGGCAATGTCGATTTCATCTTTGGAAACTCGGCATCAATCTTCCATGACTGTGTAATCCTGGTGAAGCCAAGGCAAGCCGATCCAGAGAAGGGAGAGACCAATGCCATCACGGCACAGGGCAGGACAGACCCTGCTCAGGCAACTGGCTTTGTCTTCCAGAACTGCGTGTTTAATGGCACTGAGGAATACATGGCATTGTATAACAGCAAGCCTCAAGTACACAAGAACTATCTAGGCAGGCCATGGAAGGAGTATGCTAGGACAGTAATGATTAATTCGGTCATGGAATCCCTGATTATGCCGGACGGTTGGATGCCTTGGAGCGGGGACTTTGCGCTGCCGACGCTATACTATGGAGAATTCGAGAACACAGGACCCGGTTCAAGTTTGGCTAAAAGGGTTCCATGGAGCAGCAAGATCCCCAGTGAACATGTTGATACTTACTCGCTTCAGAATTTCATTCAAGCAGCTGATTGGGCTCCATCATCTCAGTGA 1689 0.5441 MMNRKPHKPLLLLISTFLFPLTRSTILILSMASLFSISLCIFFTLFLSSSHAQPSLAILQACKATRFPLICHTTLASPTLTNLDPSPVELVQSAIDSSYTKLHEAISMVSTLYDDSLASNRTRATAAKTCIQILRYSRRRTFLAANAIPRHATKDARAWLGASLAYQYGCWSSLKYANDTISVAEAMVFVDSLTYITSNALSMVASYDLFGNDTASWRPPLTERNGFWEPTVTGSGTTLGVPSNLTPDATVCKDGDGCYRTVQEAVHSAPDNARVGEKPYVIHIKEGVYEEKVRVPPKKRNVVFVGDGIGKTIITGSRSVGLMPGMTTYNSATVGVLGDGFMARDLTIQNTAGADAHQAVAFRSDSDRSVIENCEFLGNQDTLYAQSLRQFYKSCRIVGNVDFIFGNSASIFHDCVILVKPRQADPEKGETNAITAQGRTDPAQATGFVFQNCVFNGTEEYMALYNSKPQVHKNYLGRPWKEYARTVMINSVMESLIMPDGWMPWSGDFALPTLYYGEFENTGPGSSLAKRVPWSSKIPSEHVDTYSLQNFIQAADWAPSSQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90649g00019 562 NCBIfam pectinesterase inhibitor domain 32 204 IPR006501 GO:0004857
Stsc90649g00019 562 SMART PMEI_2 53 203 IPR006501 GO:0004857
Stsc90649g00019 562 Pfam Plant invertase/pectin methylesterase inhibitor 59 203 IPR006501 GO:0004857
Stsc90649g00019 562 SUPERFAMILY Pectin lyase-like 246 560 IPR011050 -
Stsc90649g00019 562 Pfam Pectinesterase 248 554 IPR000070 GO:0030599|GO:0042545
Stsc90649g00019 562 FunFam Probable pectinesterase/pectinesterase inhibitor 51 56 206 - -
Stsc90649g00019 562 Gene3D - 242 562 IPR012334 -
Stsc90649g00019 562 FunFam Pectinesterase 242 562 - -
Stsc90649g00019 562 PANTHER PECTINESTERASE 38 559 - -
Stsc90649g00019 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 204 IPR035513 -
Stsc90649g00019 562 CDD PMEI-like_3 61 208 - -
Stsc90649g00019 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 207 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90649g00019 Stsc-Chr90649 158911 161259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90649g00019 58 561 Carbohydrate Esterase AT5G09760 61.176 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90649g00019 - - gmx:100802102 725.317