Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90648g00026 ATGGGTTCCGGCCGCGGTTTGCTTGGTTTCTTTACTTTCCTTTGCTGTCTTGGGCTTCTTCACTCAGCGCATTTCGACTGTGGAAATCTCGGACAGCTTAGGTACCCTTTCACCAACATTGATAGCACAGAATGTGGCCTGTACATAAGTAATTGTGACAAGCCAGAGGCAGATGCTCAAGTTTTTCTTGGAAACCAAACATACAGAGTTGAAAGCACACTTATGGTGGATAATTTTTTCAGTTTCATTTTGGTGCAAGAGACCGGTGGTGCTGTAAATTTATGGGAGCTTCGTGGGAACTTGTCTCTTCGGGTAGTAAACCGTGTTGCCTTCTTCAAATGCATTCATGAGTATCAGCCTGAAGAAAATGGCATATTCGAATATACAACGTGTGGTGGTGATGATGGTCATCATCTTGCAAATTATGATGTGTACTTTGGCTCAGATCGTTTCTTTCCTTTAGATGATATTCATGACATGTTCCCTAGCTTGTCAGAAGCCTGTTCAGGTGATTCGAGTGGTCAAGAGCTCAATCAGACTCACCCCTGCACATCTTTCAAATCTTTTGTTGTCATTGAAGTAACATCTGCACGTTCTTCTTACCCAGATCGGGAAGTGATTCTTAGAAAGGGAAAGAGAGAGACTGGGAAGGTGCCAGTAGTAGATCAACAAGTTATTCGTACGAAGGGAAAGATAGGGGCTTGGAAGGCGGCAGTAATAGGGTTATCTACCGGGTTCGCTGCTATGATTATAATTGCCTTGGCTCAGTTATGTGCTATTCTTTTACTGTATAAACGGAGACACAATTCTTCAGGCTACCAAGGAAAATTATGGAACATGTATTCTAGGAGTCCAAACTCAAACACAAACCCAAAGCTAGAAAGTGGAAATGTCTACTTCGGAATCCCTCTCTTCTCCTATGAAGAGCTCCAGGACGCTACTAACAATTTTGACCAAACTAAAGAACTTGGAGAAGGTGGCTTTGGAACTGTTTACTATGGAAAGCTTAGAGATGGACGAGAAGTTGCAGTGAAACGCCTATTCGAGCGTAACTACAAGCCAGTTGAATCATTCATCAACGAGATTCAGATCCTTACACGCTTGCGCCACACGAATCTTGTATCCCTCTATGGCTGCACTTCACGCCATTCTCGTGAGCTTCTCCTGGTCTATGAATACATCCCAAACGGCACTCTCAGTTACCATCTCCGACTCCGACGAGGTGACAATACAAGTACAGCGTCGAGCTTATTGCCATGGCCGGTGAGAATGAAAATCGCCATTGAAACTGCTTCTGCATTGGCCTATCTCCATGCATGCGGTATCATCCACCGTGACGTGAAAACCAGCAACATTCTGCTTGACAACAACTTCGGTGTTAAGGTTGCCGATTTCGGGCTTTCTAGATTGTTCCCGAATAATGTCTCACATGTCTCGACGGCGCCGCAGGGAACCCCGGGTTATGTTGATCCAGAGTACCGGCTATGCTATCAACTTACAAACAAGAGTGATGTGTATAGTTTCGGAGTGGTTCTTGTCGAGCTGATATCGGCTCTGCCGGCAGTTGATGTGAATAGGGAAAGGGATGATATTAAGTTGGCAAATGTAGCTGTAAGGAAGTTTAAAAAGGGGGAATTTTGGGAATTGGTGGATCCTTCTCTTGAAATTCAGCTAGACTATGTTTCTAGAAGGATGATAATTTTGGTGGCGAAATTGGCTTTTCAGTGTTTACAGGGAGAGAATGATTTGAGACCGTCTATGGCAGAGGTATTAGAGGCGCTGCAGAGGATTGAAATTGGGAGGGAAGAGGCAGAGAATTTGGAGGGCAGAGAGGTTCACCGTGCTGGAGTTTCGATGAATTATGCAGAAGCTCAAAACTCTTTGATGAATGCCAAGCGTCATCTCCAAACATTTTGA 1917 0.4439 MGSGRGLLGFFTFLCCLGLLHSAHFDCGNLGQLRYPFTNIDSTECGLYISNCDKPEADAQVFLGNQTYRVESTLMVDNFFSFILVQETGGAVNLWELRGNLSLRVVNRVAFFKCIHEYQPEENGIFEYTTCGGDDGHHLANYDVYFGSDRFFPLDDIHDMFPSLSEACSGDSSGQELNQTHPCTSFKSFVVIEVTSARSSYPDREVILRKGKRETGKVPVVDQQVIRTKGKIGAWKAAVIGLSTGFAAMIIIALAQLCAILLLYKRRHNSSGYQGKLWNMYSRSPNSNTNPKLESGNVYFGIPLFSYEELQDATNNFDQTKELGEGGFGTVYYGKLRDGREVAVKRLFERNYKPVESFINEIQILTRLRHTNLVSLYGCTSRHSRELLLVYEYIPNGTLSYHLRLRRGDNTSTASSLLPWPVRMKIAIETASALAYLHACGIIHRDVKTSNILLDNNFGVKVADFGLSRLFPNNVSHVSTAPQGTPGYVDPEYRLCYQLTNKSDVYSFGVVLVELISALPAVDVNRERDDIKLANVAVRKFKKGEFWELVDPSLEIQLDYVSRRMIILVAKLAFQCLQGENDLRPSMAEVLEALQRIEIGREEAENLEGREVHRAGVSMNYAEAQNSLMNAKRHLQTF 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90648g00026 638 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Stsc90648g00026 638 FunFam Wall-associated receptor kinase-like 20 394 607 - -
Stsc90648g00026 638 SUPERFAMILY Protein kinase-like (PK-like) 298 600 IPR011009 -
Stsc90648g00026 638 ProSiteProfiles Protein kinase domain profile. 317 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90648g00026 638 SMART serkin_6 317 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90648g00026 638 Coils Coil 587 610 - -
Stsc90648g00026 638 FunFam receptor-like protein kinase FERONIA 281 393 - -
Stsc90648g00026 638 CDD STKc_IRAK 323 597 - -
Stsc90648g00026 638 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 611 IPR044652 GO:0004672
Stsc90648g00026 638 Pfam Protein kinase domain 318 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90648g00026 638 Gene3D Phosphorylase Kinase; domain 1 289 393 - -
Stsc90648g00026 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Stsc90648g00026 638 Gene3D Transferase(Phosphotransferase) domain 1 394 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90648g00026 Stsc-Chr90648 180270 185610 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90648g00026 25 611 Receptor kinase-like Gene Family AT1G25390 42.977 2.03e-136 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Stsc90648g00026 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90648g00026 - - ahf:112802646 857.055