Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90648g00024 ATGTATCGTGGGCTTTCACCGACAATACTTGCTTTACTACCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAGGGATTGCTTCGTTCACAGGATGGTAGCAATGAACTCACAACTATTAGAAACGTTATAGCTGCTGCTGGTGCTGGGGGAGCAACAGCATTGTCGACGAACCCATTGTGGGTTGTTAAGACAAGACTCCAAACACAAGGAATGAGGCCGGATGTTGTTCCTTACAAAAGTGTTCTGTCCGCTTTGACAAGGATTACCCATGAGGAAGGATTGAGAGGACTATATAGTGGCATTTTGCCTTCATTGGCTGGTGTAAGTCATGTTGCGATTCAATTCCCAGCATATGAAAGTATCAAGTCGTACATGGCAAAAAAAGATAATACAACTGTTGACAAGCTTAGTCCTGGAAGTGTTGCCATTGCATCGTCAATTTCAAAAGTAATCGCCTCTGTAATGACTTATCCGCACGAGGTGATACGTTCAAGGCTGCAAGAGCAAGGCCAGTCCAAAAACATGGGGGTTCAGTATGCAGGAGTTATAGATTGTACTAAGAAGGTTTTCCATAAAGAAGGTATTCCGGGCTTTTATCGCGGTTGCGCAACCAATCTGTTAAGAACAACTCCATCTGCTGTTATTACCTTCACCAGTTACGAGATGATACATCGATTCTTGTTGCGGCTTATACCCGAGGACGAGGGCTATCCGCAGAGCCGTCCAAAATCCAAGGCACTTAACAAGTCCCAGGAAGAAGGCAGTAACATCATTAAGAATGACTCTTCTGATATGAGGCCATCGCCATCACAGTCTAACAAGAAAGGCTCATCAATTCCTTTGGGAAACAAATAG 864 0.4387 MYRGLSPTILALLPNWAVYFTVYEQLKGLLRSQDGSNELTTIRNVIAAAGAGGATALSTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITHEEGLRGLYSGILPSLAGVSHVAIQFPAYESIKSYMAKKDNTTVDKLSPGSVAIASSISKVIASVMTYPHEVIRSRLQEQGQSKNMGVQYAGVIDCTKKVFHKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRLIPEDEGYPQSRPKSKALNKSQEEGSNIIKNDSSDMRPSPSQSNKKGSSIPLGNK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90648g00024 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 29 IPR018108 -
Stsc90648g00024 287 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 1 230 - -
Stsc90648g00024 287 Gene3D Mitochondrial carrier domain 1 230 IPR023395 -
Stsc90648g00024 287 MobiDBLite consensus disorder prediction 246 287 - -
Stsc90648g00024 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 139 229 IPR018108 -
Stsc90648g00024 287 MobiDBLite consensus disorder prediction 239 287 - -
Stsc90648g00024 287 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 235 IPR044712 GO:0006862|GO:0055085
Stsc90648g00024 287 ProSiteProfiles Solute carrier (Solcar) repeat profile. 39 127 IPR018108 -
Stsc90648g00024 287 SUPERFAMILY Mitochondrial carrier 1 225 IPR023395 -
Stsc90648g00024 287 Pfam Mitochondrial carrier protein 1 31 IPR018108 -
Stsc90648g00024 287 Pfam Mitochondrial carrier protein 38 131 IPR018108 -
Stsc90648g00024 287 Pfam Mitochondrial carrier protein 139 231 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90648g00024 Stsc-Chr90648 173021 179099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90648g00024 1 287 Chloroplast and Mitochondria Gene Families AT1G25380 64.966 6.00e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90648g00024 K15115 - gmx:100816376 464.151