Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90648g00013 ATGGAGGCTCAACTCCATGATGACCACCCTAAACGACAAAATCCTCTCAAGCTTTTCGGCTTCAGTGTGGACCACGATGACGATGCCGTTTCAGCACCCTTCGACGACGCATCAGATTCCATCGCCAAGCCTTCCTCCCTGTTCACATCGCCGGAATCCAACCCCAGAGACGGAGGCGCGTTGGAGTTCCCTCCCTCCTCCTCCTCCTCCGGCGAAAGAAAGTACGAGTGCCAGTACTGCTGCCGCGAGTTCGCGAACTCGCAGGCGCTTGGAGGCCACCAGAACGCTCACAAGAAAGAACGCCAACAGCTGAAGCGCGCGCAGCTCCAAGCAACGCGAAACGCTGCCGTTTCGTTCATTCGAAACCCGATCATATCCGCCTTCGTCCCGCCTCCTCAACTTCTTGCCCCGCCGGGGTCCGTAATGGTCCAGTCGGGACCTCATCAGCCATGGCTCTACATGCCGCCACGTGGTGCCCCTCCTCCTTTCCACGTGTCCGTTTCTCACGGCTGCGTCTTCTCTAACAGCAATAGCAACGGAAATTTTAGTAACTGTAACGGCAGTGGTGGTGGTGGGAATTGTAGATCCACGGGTGCAGGGGTGGTACCTTACGGTGGTGGAGTAGAGGAATCGTCGCCCAGATTTGATAAGATGGGCTCGCAAGTACAGGCCCGGGCCAATTACGTTAAGATTGAAGGGCCTCCTCTGGGTGGGTTATCGTCGAACGGGGATGTAGGGACAAATTTGGATGATGGGTTAGGTTTGGACTTGGAGCTCGGTCTAGGCCCACCTTGA 795 0.5648 MEAQLHDDHPKRQNPLKLFGFSVDHDDDAVSAPFDDASDSIAKPSSLFTSPESNPRDGGALEFPPSSSSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFIRNPIISAFVPPPQLLAPPGSVMVQSGPHQPWLYMPPRGAPPPFHVSVSHGCVFSNSNSNGNFSNCNGSGGGGNCRSTGAGVVPYGGGVEESSPRFDKMGSQVQARANYVKIEGPPLGGLSSNGDVGTNLDDGLGLDLELGLGPP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90648g00013 264 MobiDBLite consensus disorder prediction 1 20 - -
Stsc90648g00013 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Stsc90648g00013 264 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Stsc90648g00013 264 Gene3D Classic Zinc Finger 60 122 - -
Stsc90648g00013 264 SUPERFAMILY beta-beta-alpha zinc fingers 71 102 IPR036236 -
Stsc90648g00013 264 PANTHER ZINC FINGER PROTEIN 5 12 263 IPR044299 GO:0010090
Stsc90648g00013 264 MobiDBLite consensus disorder prediction 29 72 - -
Stsc90648g00013 264 FunFam Zinc finger protein 6 65 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90648g00013 Stsc-Chr90648 86365 87462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90648g00013 16 263 C2H2 Transcription Factor Family AT1G68360 43.590 1.85e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90648g00013 - - gmx:102663095 244.202