Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90647g00022 ATGGATCTGAAAAGCCTCTTCACATTTTTTCTCTTATTGATGCCATCATTCTGTTCCTCCCACCAATACCTGATGAGGATTAACAACATTCTCAATACTAATCGTAAGATACTTCCAACAAAACAACAACTACCCAATATTGATGACAATAATAATGTTACTTCTTATGCTGTCATCTTTGATGCTGGTAGCTCTGGATCTCGTGTTCATGTCTTCCATTTTGACCAAAACCTCAACCTCCTTCATATTGGCAGCGATATTGAGTTTTATAAAAAGATCGAACCAGGGTTGAGTGCATACGCAGATAATCCAGAAGAAGCTGCAAACTCTCTGATTCCACTCATAGACGAGGCACAAAATATTGTACCACAAGAATTCCAACCTAACACACCCCTTAGGCTTGGGGCAACTGCAGGTTTAAGGCTGCTGGGGGTTGATACTGCTGAAAGAATATTGCAAGCGGTCAGGGATATGTTCAGGACAAGAAGTAATTTTGATGTTGAATCTGATGCAGTAACTGTTATTGATGGAAGCCAAGAAGGTTCTTATATGTGGGTGGCACTTAACTATCTATTGGGGAAATTGGGGAAGGAGTATTCAGAGACAGTGGCGGCAGTTGATCTTGGAGGTGCATCAGTTCAAATGGTATATGCTGTGTCAAAATACACTGCTCTAAATGCACCAAAACCACTTGATGGACAGGATCCATACATTAAGAATGTCATTCTTAAGGGACAGGAATATAATCTCTATGTTCACAGTTACCTGCGGTACGGTAGTGATGCTGCTCGTGGTGAGATTTTGAACATCACTCATAATTCCGCTAACCCTTGCGTTTTAGCCGGTTTTGATGGGACATATAATTACTCAGGAAATGAGTATAAGGCATATGCACCAAGTTCAGGGTCAAGCTTTGAGAAATGCAGGGAAACAGTGCGTGAGGCTCTGAAATTGGAAGCACCATGTCCATATAAGAATAAGGAGTGCACTTTTGGTGGAATATGGAGTGGTGGTGGTGGCAGTGGACAGAAAAATCTCTATGTTGCTACATCTTTCTTTTATCTCGCATCAGAGACGGGTATAGCTGATCCAAATAAGCCAAATTCGAAGGCTGTTCCGATGGATTACAAGGTTGCAGCCAAGAAAGCATGTGCTACCAAATATGAGGATGCTGCTTCCATTTATCATCTTGTTACCACTGACAGACTTCCCTATGTTTGCATGGATCTCACTTACCAATATACATTGCTCGTTGAGGGATTTCGTATAAATCCATTGCAAGAGATCACAGTTACACAACAAATTGAATATGAAGATGCTGTGGTAGATGCAAGCTGGCCTCTAGGAAGTGCCATAGAAGCCTTGTCCTCATTACCAACATTTGAGCGATTAATGTATTTTATTTAA 1407 0.4108 MDLKSLFTFFLLLMPSFCSSHQYLMRINNILNTNRKILPTKQQLPNIDDNNNVTSYAVIFDAGSSGSRVHVFHFDQNLNLLHIGSDIEFYKKIEPGLSAYADNPEEAANSLIPLIDEAQNIVPQEFQPNTPLRLGATAGLRLLGVDTAERILQAVRDMFRTRSNFDVESDAVTVIDGSQEGSYMWVALNYLLGKLGKEYSETVAAVDLGGASVQMVYAVSKYTALNAPKPLDGQDPYIKNVILKGQEYNLYVHSYLRYGSDAARGEILNITHNSANPCVLAGFDGTYNYSGNEYKAYAPSSGSSFEKCRETVREALKLEAPCPYKNKECTFGGIWSGGGGSGQKNLYVATSFFYLASETGIADPNKPNSKAVPMDYKVAAKKACATKYEDAASIYHLVTTDRLPYVCMDLTYQYTLLVEGFRINPLQEITVTQQIEYEDAVVDASWPLGSAIEALSSLPTFERLMYFI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90647g00022 468 Gene3D - 56 452 - -
Stsc90647g00022 468 FunFam Apyrase 1 176 436 - -
Stsc90647g00022 468 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 460 IPR000407 GO:0016787
Stsc90647g00022 468 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 15 458 IPR000407 GO:0016787
Stsc90647g00022 468 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 175 190 IPR000407 GO:0016787
Stsc90647g00022 468 CDD NBD_sugar-kinase_HSP70_actin 58 217 - -
Stsc90647g00022 468 Gene3D Exopolyphosphatase. Domain 2 176 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90647g00022 Stsc-Chr90647 160369 222859 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90647g00022 55 457 Calmodulin-binding Proteins AT3G04080 53.465 5.18e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90647g00022 K14641 - gmx:100781628 590.497