Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90647g00013 ATGCCACAAAGAGAGCTGGAGCCGCTACAAGATTCCAAGCAGTTGAAGGCTCCGCCAGTCGCCGCCGCCAACGGTCAGATCCGCTACCGATCGCCGTCCTCTGCAGAGCTCTTCGACGGACAGTCAAGCGGGAACTCACCTCCGTCACACGCCGCCGACCACAACTCGCCGGAATTCGAGCCCTCCGGCAAAATGCTGAAGCGCCCCGGCCGCCAGGAGTCCCTTGCCGACAAGATCTACCGGTTCCGAGCAACGCTGCTCGTGGTGTCGATCCCGCTTGTCCTCATCACCTTCGTCCTCTACATGATGCCTTCTTCTTCATCCAATGACTCCGTCGCAGAGTTCACCCTCGTCAACCGGAAGATGTCGCCGGAGAAGAATCCAGGCGGATCCTATGCCGTGATCTTTGACGCTGGCAGCTCCGGCAGCCGCGTCCACGTCTTCCACTTCGATCAAAACATGGATCTCATTAAACCCGGTTTGAGCGCCTACGCTCAGAATCCGCAGCAGGCAGCGGAGTCTCTGGTATCGCTTTTGGATAAGGCGGAGAGTGTAGTTCCAAGGGAATTGCGATCCAAAACACCAGTGCGCGTTGGGGCGACTGCTGGTTTGAGGGCTTTGGAAGGAGATGCATCTGATAGGATCTTGCAAGCGGTGAGGGACTTGCTTAAGCAAAGAAGCAGCCTGAGATCCGAGGCCGATGCGGTTACAGTGCTGGATGGAAATCAAGAAGGCGCTTTTCAATGGGTGACTATCAACTATTTATTGGGAAACGTAGGAAAAGATTATTCAAAGACTGTTGGTGTAGTTGATCTTGGGGGTGGATCTGTTCAAATGGCTTATGCAATCTCAGAGACAGATGCTGCCATGGCTCCCAAAGTATCGGAAGGAGAGGACCCATATGTTAAGGAGATGTTCTTAAGGGGAAGGAAATACTACCTCTATGTTCACAGTTACTTGCACTATGGTTTGCTAGCAGCCCGTGCAGAGATTTTAAAGGTTTCCGATGATGCCGAAAACCCTTGCATCTTATCTGGCTTTGATGGATCATATAATTATGGGGGGAAGTCATTCAGGGCCTCATCTTCCCCTTCTGGTGCTAGCTTAAATGAATGCAAAGGCATAGCTCTTAAGGCTCTCAAAGCTGGTATTGCTGACTCAAACTCACCTGTTGCAATAGTTCGCCCAGCAGATTTTGAGGATGCTGCTAAGAAAGCTTGTCAAACAAAACTTGAGGATGCCAAATCCAGTTATCCGCATACTGAGGATGGGAACCTTCCATACATTTGCATGGATCTTGTATACCAATATACATTGCTTGTTGATGGATTTGGTATCTATCCATGGCAAGAGATTACATTGGTGAAGAAAGTAAAATACAATGATGCCCTTGTTGAGGCAGCATGGCCCCTAGGCAGCGCCATAGAAGCTGTATCATCCACGTAA 1446 0.5041 MPQRELEPLQDSKQLKAPPVAAANGQIRYRSPSSAELFDGQSSGNSPPSHAADHNSPEFEPSGKMLKRPGRQESLADKIYRFRATLLVVSIPLVLITFVLYMMPSSSSNDSVAEFTLVNRKMSPEKNPGGSYAVIFDAGSSGSRVHVFHFDQNMDLIKPGLSAYAQNPQQAAESLVSLLDKAESVVPRELRSKTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSSLRSEADAVTVLDGNQEGAFQWVTINYLLGNVGKDYSKTVGVVDLGGGSVQMAYAISETDAAMAPKVSEGEDPYVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKVSDDAENPCILSGFDGSYNYGGKSFRASSSPSGASLNECKGIALKALKAGIADSNSPVAIVRPADFEDAAKKACQTKLEDAKSSYPHTEDGNLPYICMDLVYQYTLLVDGFGIYPWQEITLVKKVKYNDALVEAAWPLGSAIEAVSST 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90647g00013 481 CDD NBD_sugar-kinase_HSP70_actin 134 281 - -
Stsc90647g00013 481 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 239 254 IPR000407 GO:0016787
Stsc90647g00013 481 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 382 480 IPR000407 GO:0016787
Stsc90647g00013 481 Gene3D - 119 240 - -
Stsc90647g00013 481 MobiDBLite consensus disorder prediction 1 70 - -
Stsc90647g00013 481 MobiDBLite consensus disorder prediction 27 52 - -
Stsc90647g00013 481 Pfam GDA1/CD39 (nucleoside phosphatase) family 130 381 IPR000407 GO:0016787
Stsc90647g00013 481 Pfam GDA1/CD39 (nucleoside phosphatase) family 394 480 IPR000407 GO:0016787
Stsc90647g00013 481 Gene3D Exopolyphosphatase. Domain 2 388 459 - -
Stsc90647g00013 481 Gene3D Exopolyphosphatase. Domain 2 241 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90647g00013 Stsc-Chr90647 110953 117835 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90647g00013 70 480 Calmodulin-binding Proteins AT3G04080 61.987 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90647g00013 K14641 - gmx:100786073 689.878