Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90647g00001 ATAACAGCATGCAAGTGTGGGGGCTTCGTAATTGGCTTCACCACAAGCCACACAACCTTCGATGGTCTCAGCTTCAAAGCTTTCTTAGACAACCTCGCCGCTTTGGCTTCCAACAAACCCATGCCCCTCACCCCCTCACACGAAAGACACCTCCTCGCCGCACGATCCCCGCCACGTGTCACCTTCCCACACCCTGAGATGCTTGACCTCGGAGACTTCCCCACAAGCGCCGAATCCGGCGTCTTCCAAGCCTCCTCAGAGGAACTCCACTTCAACATCTTCCACCTAACCAACGATAACATCAACTACCTCAAGGACAAAGCCAAGGGCAATAACGTAAATTCCCGCGTCACGGGTTTCAACGTCGTAACCGCTCTCATCTGGCGGTGCAAGGCTCTGTCCTTCTCCCCGCCCGATCCGAACCGGTCGTCCACCATACTCTACGCGGTGGATATCCGGTCGAGGCTGAGCCCTCCGCTGCCGAGATCGTACGCCGGGAACGCGGTTCTGACGGCGTACGCGACGGCGAAATGCGAGGTGCTGGAGAAGGGACCGTTTGCGAGGTTGGTGGAGATAGTGACGGAAGGTGCGAAGAGAATGAACGATGAGTATGCGAGGTCGATTATAGATTGGGGAGAGTTGCATAGCGGGTTTCCAAATGGGGAAGTTTTGGTGTCTTCGTGGTGGAGATTAGGGTTTGAAGAGGTGGAGTATCCGTGGGGCAAGCCAAGGTATTGTTGTCCTGTGGTGTACCATAGGAAGGATATTATACTGCTGTTTCCTCCTCTTGGTGGCGGCGATGGGATTAATGTCATAGTGGCACTTCCTCCTAAGGAAATGGAGAAATTCAAGACTCTCTTCTATGAATTCTTGATCTGA 879 0.537 ITACKCGGFVIGFTTSHTTFDGLSFKAFLDNLAALASNKPMPLTPSHERHLLAARSPPRVTFPHPEMLDLGDFPTSAESGVFQASSEELHFNIFHLTNDNINYLKDKAKGNNVNSRVTGFNVVTALIWRCKALSFSPPDPNRSSTILYAVDIRSRLSPPLPRSYAGNAVLTAYATAKCEVLEKGPFARLVEIVTEGAKRMNDEYARSIIDWGELHSGFPNGEVLVSSWWRLGFEEVEYPWGKPRYCCPVVYHRKDIILLFPPLGGGDGINVIVALPPKEMEKFKTLFYEFLI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90647g00001 292 Coils Coil 288 292 - -
Stsc90647g00001 292 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 287 - -
Stsc90647g00001 292 Pfam Transferase family 1 288 - -
Stsc90647g00001 292 Gene3D - 75 289 IPR023213 -
Stsc90647g00001 292 Gene3D - 1 68 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90647g00001 Stsc-Chr90647 2667 3545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90647g00001 1 290 Monolignol Biosynthesis Gene Families AT5G48930 27.723 4.48e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90647g00001 K13065 K15400 gmx:100805510 459.144