Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90645g00001 ATGAAACTTTTATCAATCCAAATTCCAAGATGGCTGATACATTCAGAGCCATGGAGATTCGTTGGTTTCACTTCATCCATAGTTGGACTACTCTGTTACGCTCTCAGCACCTCTTTCAACTTCCTATTCGGAAAACGGAACTTGCTGAAAATGGTCATATACATTGTTTTCAGTTTTATAATTTGCCTTGCCACATTCTTTGCCAATGTATGGCAACACTCTGCAAGCCTCCGATTCAGAGCTCACATGGCTTTCTTAGTTCTGACGGTTACCTCTGTTTACTCATTCTTTTTCGATAAAGCAGTGAACGGAAAACCAGATGTGTTTAGCCTTGTATTATGTGCAGCTTTTGCCATCATGTCGCTCAGTTTGTCGAGACAGATTCACTGTGGATTCGAGGTGGATCTGCTGTATTTCTTTCTTGGAGTATTGATAATTCAACTCATGAAGATAAAGTTGTTGCTAGGAACAATTGGAGTTTGTTTCAGTTATTTCCTTGTTATTCTTCGATCCTCTTTGGATTTCCAGCCAGAAAACGATGATCTCCAACTCGAAGATCAAGAAGCTATAGCCATCAGAGTTGATTCACAACAATCTAATAATGATTCACAGCTCGCGGCTTGTATTGAGGCTCTTCGGAACAGAAACTCTGATCTGATCCAAATTATTTTGGAGCAGGTGAAAGAAGAAAACAAAGACCAGAAATCGTTGACCGATGCTGAAGAAGAGGAACAGATTCCGGTGGTGAGTTATGACATCAAGATCGACTCGCTTCTTGCTGAGACGATGATCGACCTCCACAAGATTGCACAGCAGACGGCGGTGGCCGGAGAATTTGGTGAGGAGTTCATAAAAGTGTACGCTAGTTGCCGGCGGGAGTTCTTGGAAGAGAGTCTCATGAACTTGGGGTTGAAGAAGCTGAGCACCGATGAGGTTCACAGCATGTCATGGGAGAATCAGAGGGACATGGCGGAGAGGTGGATCAAGGCCTGTAACGTCTGCCTCAAGATCTTGTTCGCCGGAGAGCGCAGACTCTGCGAAAGAGTCTTCTCTGGATTCCTGGCCGCCGCGAATCTCTCATTTATGGATATCTCCGGAGAAACTGGCACCTGGCTTCTAGATTTTGCGGATGCTGTAGCAACTGCGAAACCCGCGCCAGGGCGGCTGTTCATGATTCTTGACATGTTCGAGGCATTACGCGACATGATTCCGGAGTTTGAAAGCCTCTTTCCTGATCAGCTGAGAAATGAAGCGGATACAGTTTGGAAGAGGTTGGGTGAAGCAATTTGGAGGAATTTCATGGAGTTAGGGGATGTTATTCGCCACCAGACACCGGAGATGGTTTCTAGTAGCAACATCCATCACCTTACTCGCTACTTCATGAACTACCTCCTTCTTGCTTGTGATTCACGGCAGACATTGGAGCAAGTTTTTAACGAGCACATGCATTTGTTGAAAGAGTATCCTGAGCTTGAGCCTGATGGTAGATTTGGATCCAGTTCTTCGCTGTCTATGAAAACCGTAATTGATTGGACTATGGAAATGTTTGAGTGTAATTTGGAGGCAAAGTCAAAAACTTTTGAGGACCTTGCTTTAAGCCATGTTTTCCTGATGAACAACGGTCACTACATGATTCAAAAGGCGGAAAATAGTGAATTGGGAATCCTTTTGGGTGATGATTGGTTCCAGAAACAGTCTGAAAAAATTAAGCAGTACCATGTTGGGTATCTCAGTAGTTCATGGGACAAGGTGTTCGAGATTTTAAAACTTGATGGTAGTAATGACAGTGTCCAAACTCAGCCTAATGTTGCGGCAAAGGAAATGAAAAAGAAGCTGAAGATGTTCAACATGCAGTTTGAGAATATATGCAGGGTTCAATCTTCTTGGTATGTAGAAGAGAAGATAAGGGAAGATATAATGATTGTCCTTGTGAAGACCCTTTTGCCTGCCTATGGATGCTTCATTAGAAGGTTCCAAAGTGTTCCGAAACTTGGCAAGAATGCTAAAAAGTATGTTAAGTATGGAGTTGAGGACATTGAAACAAAACTCAATGATTTGCTTCGAGGTGTCACTGCATCAAGTCGTCGCCAACAGTAA 2097 0.4335 MKLLSIQIPRWLIHSEPWRFVGFTSSIVGLLCYALSTSFNFLFGKRNLLKMVIYIVFSFIICLATFFANVWQHSASLRFRAHMAFLVLTVTSVYSFFFDKAVNGKPDVFSLVLCAAFAIMSLSLSRQIHCGFEVDLLYFFLGVLIIQLMKIKLLLGTIGVCFSYFLVILRSSLDFQPENDDLQLEDQEAIAIRVDSQQSNNDSQLAACIEALRNRNSDLIQIILEQVKEENKDQKSLTDAEEEEQIPVVSYDIKIDSLLAETMIDLHKIAQQTAVAGEFGEEFIKVYASCRREFLEESLMNLGLKKLSTDEVHSMSWENQRDMAERWIKACNVCLKILFAGERRLCERVFSGFLAAANLSFMDISGETGTWLLDFADAVATAKPAPGRLFMILDMFEALRDMIPEFESLFPDQLRNEADTVWKRLGEAIWRNFMELGDVIRHQTPEMVSSSNIHHLTRYFMNYLLLACDSRQTLEQVFNEHMHLLKEYPELEPDGRFGSSSSLSMKTVIDWTMEMFECNLEAKSKTFEDLALSHVFLMNNGHYMIQKAENSELGILLGDDWFQKQSEKIKQYHVGYLSSSWDKVFEILKLDGSNDSVQTQPNVAAKEMKKKLKMFNMQFENICRVQSSWYVEEKIREDIMIVLVKTLLPAYGCFIRRFQSVPKLGKNAKKYVKYGVEDIETKLNDLLRGVTASSRRQQ 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90645g00001 698 Gene3D Exocyst complex component Exo70 186 697 - -
Stsc90645g00001 698 SUPERFAMILY Cullin repeat-like 237 686 IPR016159 -
Stsc90645g00001 698 Pfam Exo70 exocyst complex subunit 325 685 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc90645g00001 698 PANTHER EXOCYST COMPLEX PROTEIN EXO70 199 686 IPR004140 GO:0000145|GO:0006887
Stsc90645g00001 698 Coils Coil 224 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90645g00001 Stsc-Chr90645 1605 3701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90645g00001 247 695 EXO70 exocyst subunit family AT5G58430 50.110 1.15e-143 431