Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90644g00038 ATGAGTTGCCTCAATTGCTGCAAGACTGCTGAATCGCCATCTTTCCGGGTGGCGGCGACGACGGAGAGTGTAAAACGGAAAATGTCCAGAGGCTATATCACATTCAAATCATTAGCAGCCGCGGTGTCAATGAAAACAGGTAGCAGCAAGCACAGACAAATCAATGAACAGATTAGAAGATACGGAGAAGTGAAGAATGAAATCAGAGTATTCACTTACAATGAAATTTCTGAGGCAGCAGAAAAGTTCAGTTCTGATAACCTTCTTGGAGAAGGAGGATTTGGTTCTGTCTACAAAGGTTACATATGTGATCAGCATGTAGCAATGAAGCAACTTAACAGGCAAGGAGCACAAGGAACAAGAGAATTTTATGCAGAGGTTTTGATGTTTAGTTTGGTGAAGCATCCAAACCTTGTACAGCTAGTTGGTTATTGTACAGAAGGTGATCATAGGGTTTTGGTCTATGAGTACATGGCCAATGGAAGCTTGGAAAATCACCTCCTAGACCTACGCGATGGTAAGAAGCCTTTGGATTGGTACACAAGGATGAAAATTGCTGAGGGAGCAGCCATAGGGCTTGATTATTTGCATAGCTCTGCAGACCCTCCGGTTATATACCGTGATTTCAAATCGTCCAATATACTACTAGACGAAGATTTCAATGCAAAACTTTCCGATTTTGGACTAGCTAAGATTGCTCCAAATGGCCAGGGAACTATTACATCCAGGGTGATGGGAACCTTTGGCTACTGTGCACCAGAATATGCTTCTGGTGGTCAATTAACCACGAAATCAGATGTCTACAGTTTTGGTGTGGTGTTCTTGGAAATAATCACTGGCAGGAGAGTAATTGACACTACAAGAGATGTTGAAGAGCAAAACTTGATTGAATGGGCACAACCTCTTCTCAAGGATAGAAAGCAGTTCAGTCAAATTGCTGATCCTTTGCTTAATGGCGAGTTCCCTGCAAGGGGTCTATTTCAAGCACTTGCAGTGGCAGCAATGTGTCTCCAAGAGGAACCCGAGAAACGACCTGACATGGACGATGTTGTATCGGCTCTAGCAATTCTATCAGGTAGCAAGACTGAGGAAAAAGAGGTTTCTGGGGAAATAGTAAAACCTTCCAAGCATGTTGAGTCTTTCAGAGCTGCAGAATCAATGAACCAGAAAGAGCAAAGGGGATAG 1185 0.4321 MSCLNCCKTAESPSFRVAATTESVKRKMSRGYITFKSLAAAVSMKTGSSKHRQINEQIRRYGEVKNEIRVFTYNEISEAAEKFSSDNLLGEGGFGSVYKGYICDQHVAMKQLNRQGAQGTREFYAEVLMFSLVKHPNLVQLVGYCTEGDHRVLVYEYMANGSLENHLLDLRDGKKPLDWYTRMKIAEGAAIGLDYLHSSADPPVIYRDFKSSNILLDEDFNAKLSDFGLAKIAPNGQGTITSRVMGTFGYCAPEYASGGQLTTKSDVYSFGVVFLEIITGRRVIDTTRDVEEQNLIEWAQPLLKDRKQFSQIADPLLNGEFPARGLFQALAVAAMCLQEEPEKRPDMDDVVSALAILSGSKTEEKEVSGEIVKPSKHVESFRAAESMNQKEQRG 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90644g00038 394 PANTHER OS07G0668900 PROTEIN 28 366 - -
Stsc90644g00038 394 ProSitePatterns Protein kinases ATP-binding region signature. 89 110 IPR017441 GO:0005524
Stsc90644g00038 394 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 55 157 - -
Stsc90644g00038 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Stsc90644g00038 394 Gene3D Phosphorylase Kinase; domain 1 42 157 - -
Stsc90644g00038 394 SUPERFAMILY Protein kinase-like (PK-like) 65 354 IPR011009 -
Stsc90644g00038 394 ProSiteProfiles Protein kinase domain profile. 83 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90644g00038 394 CDD STKc_IRAK 89 354 - -
Stsc90644g00038 394 Gene3D Transferase(Phosphotransferase) domain 1 158 369 - -
Stsc90644g00038 394 FunFam Serine/threonine-protein kinase PBS1 158 371 - -
Stsc90644g00038 394 Pfam Protein kinase domain 85 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90644g00038 Stsc-Chr90644 201913 203729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90644g00038 1 357 Glycoside Hydrolase AT3G07070 53.973 1.32e-132 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Stsc90644g00038 Pkinase 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90644g00038 - - vvo:131599912 533.872