Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90644g00030 ATGATCTCTTCAGTGAAGTTAACAGCATCATCATCATCACCTTTCTCTGCTCTCTCAAGCAGAAAGAATTTTCATAATCTCCAAACAAGGTCTCAACTTTCCACATTACCCACCATTCAAATCGCAAAACAAAACTTGGGTCACTCTCCATTCTTCACCCACAAGCCTCTCTACCTCGCATCCACAACATTGCAGGCAATAACTGCAAGGGATAATGTTAATGGCGGTTGTGGTTCCTCCAGCATTGTGTGCCAGGCCTATGAAGCTGACAGGTCAAGGCCAATAGAGATTCAGCTTCCTGGTGATGAAGAGGTTGCTCAGAAGCTCAAGATGGGTCTCTACTTTGCTACATGGTGGTCTCTTAATGTGGTGTTCAACATATATAACAAGAAGGTCCTCAACGTCTTCCCTTATCCATGGCTTACCTCTACTTTGTCCCTTGCTGCTGGCTCCCTCATCATGTTGATTTCTTGGGCCACAAGGGTTGCTGAACCCCCTAAAGTCAACTTTGACTTCTGGAAGGCCCTTCTTCCTGTTGCTGTGGCACACACAATTGGGCATGTTGCAGCAACAGTGAGCATGTCCAAAGTTGCTGTTTCATTCACTCACATAATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTTTCAAGGTTCTTGCTCGGAGAAGCATTCCCTTTGCCGGTTTACCTCTCATTGCTGCCAATCATAGGTGGTTGTGCACTCGCCGCCGTAACCGAGCTCAACTTCAATATGATTGGGTTTATGGGGGCTATGATATCAAACATGGCATTTGTGTTTAGGAATATATTCTCAAAGAAGGGGATGAAGGGCATGTCTGTTAGTGGAATGAACTACTATGCTTGCCTTTCAATGTTGTCTTTATTGATCTTAACACCTTTTGCCATTGCTGTTGAGGGCCCCAAGCTCTGGGCTGCTGGCTGGCAAACAGCTCTTTCTCAGATTGGTCCCAATTTTATATGGTGGGTAGCAGCTCAAAGTGTGTTCTACCACTTGTATAATCAAGTGTCATATATGTCACTTGATCAGATTTCACCCTTAACATTTAGCATTGGAAACACAATGAAGAGAATCTCTGTGATTGTCTCTTCCATCATTATCTTCCACACTCCAGTTCAGCCCATCAATGCACTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTGA 1209 0.4483 MISSVKLTASSSSPFSALSSRKNFHNLQTRSQLSTLPTIQIAKQNLGHSPFFTHKPLYLASTTLQAITARDNVNGGCGSSSIVCQAYEADRSRPIEIQLPGDEEVAQKLKMGLYFATWWSLNVVFNIYNKKVLNVFPYPWLTSTLSLAAGSLIMLISWATRVAEPPKVNFDFWKALLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPLPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNMAFVFRNIFSKKGMKGMSVSGMNYYACLSMLSLLILTPFAIAVEGPKLWAAGWQTALSQIGPNFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90644g00030 402 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 109 401 IPR004696 GO:0016020|GO:0022857|GO:0055085
Stsc90644g00030 402 PANTHER SOLUTE CARRIER FAMILY 35 110 401 - -
Stsc90644g00030 402 Pfam Triose-phosphate Transporter family 109 398 IPR004853 -
Stsc90644g00030 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90644g00030 Stsc-Chr90644 158704 160889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90644g00030 81 402 Antiporters AT1G61800 83.333 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90644g00030 K15283 - gmx:100804205 598.586