Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90642g00028 ATGGAAGGAGTAGTTGGAGAGAGAGGAAGTAGTAGTAGTAGCCATGATCCCATTATTATTCCCAATAATAATAATAATAATAATCATAATAATTATGATCTCCAAATCTCATTCACAAACTCAATGGGTTTTCTTCATCATCATCACTTTGAAGATCACAATCACCAGGTTCTTGGCTTCTTGACACCTTCTTCTCTTCCAACTCAACAATCTCAATCTTCCCAACTTTCTCATCACTCTCTAAATGGTGGTGGTTGCGGCGACGGTGCTAACAGTATTAATAATACAGTTGTCACCGCCGTTGCAACCACCGCAACCACAACCACAGTTGGGTTCAACCATGATGAACTGGTTCCAAGAACTCCTTGGAATAGTGAAGACCAGGTTAGAAGTATGGATCCGAAAGGTATGAATAATAATACTAATAATGATGATGAAAATTGCAATGGAAATACAAGTGATGGAAACAACTCATCATGGTGGAGGAATAATAATAATGGAGAGAAGGGGAAGGTGAAAGTGAGGAGGAAGCTGAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTTGATGTTCTTGATGATGGTTACAAATGGAGGAAGTATGGCCAGAAAGTTGTTAAGAACAGCCTTCATCCAAGAAGCTACTACCGTTGCACCCATAACAATTGTAGAGTGAAGAAAAGAGTTGAAAGGCTTTCTGAAGATTGTAGAATGGTTATTACAACTTATGAAGGCAGACACAATCACTCTCCATGCGATGATTCTAATTCATCTGAACATGAATGCTTCACCTCTTTTTGA 807 0.3879 MEGVVGERGSSSSSHDPIIIPNNNNNNNHNNYDLQISFTNSMGFLHHHHFEDHNHQVLGFLTPSSLPTQQSQSSQLSHHSLNGGGCGDGANSINNTVVTAVATTATTTTVGFNHDELVPRTPWNSEDQVRSMDPKGMNNNTNNDDENCNGNTSDGNNSSWWRNNNNGEKGKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90642g00028 268 MobiDBLite consensus disorder prediction 116 167 - -
Stsc90642g00028 268 ProSiteProfiles WRKY domain profile. 189 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90642g00028 268 MobiDBLite consensus disorder prediction 1 26 - -
Stsc90642g00028 268 FunFam WRKY transcription factor 57 180 254 - -
Stsc90642g00028 268 MobiDBLite consensus disorder prediction 7 26 - -
Stsc90642g00028 268 Pfam WRKY DNA -binding domain 195 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90642g00028 268 MobiDBLite consensus disorder prediction 124 166 - -
Stsc90642g00028 268 SUPERFAMILY WRKY DNA-binding domain 186 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90642g00028 268 MobiDBLite consensus disorder prediction 63 83 - -
Stsc90642g00028 268 Gene3D WRKY domain 180 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc90642g00028 268 SMART WRKY_cls 194 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc90642g00028 268 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 255 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90642g00028 Stsc-Chr90642 146216 151386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90642g00028 124 268 WRKY Transcription Factor Family AT2G44745 67.296 9.44e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc90642g00028 WRKY 2.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90642g00028 - - adu:107464355 335.495