Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90640g00033 ATGGAACCGACGTTGCACGCGCAACAAACACCATCTCCGCCGCAAACTTCGCCGCGCTCCTCCACCATTATCCTCGGCAAGTACCAGCTCACGCGCCTCCTCGGCCGAGGAAGCTTCGCCAAGGTCTACCAGGCGCTAACGCTTTCCGATGGCTCCACCGTAGCCGTTAAAATCATCGATAAATCCAAGACGGTGGACGCCGCCATGGAGCCGCGCATCGTTCGCGAGATCGCCGCCATGCGCCGCCTCCATCACCACCCTAACATCCTCAAGATCCACGAGGTCATGGCTACCAAGACCAAGATCCACCTCGTTGTAGAGTTCGCGGCTGGAGGTGAGCTATTCGCCAAGATCCTCCGCCGTGGACCGCTCCCGGAGCAAGCGGCGCGGCGGTACTTCCAGCAGCTCGTCTCCGCGCTCCGATTCTGTCACCGAAACGGCGTTGCGCACCGAGACCTCAAGCCGCAGAATCTCCTCCTTGACGCATCCGGAAACCTGAAGGTCTCCGATTTCGGCCTCTCCGCGTTGCCGGAGCAGCTGAACAACGGTCTCCTACAAACCGCATGCGGAACTCCGGCTTACACCGCGCCGGAGATCCTCCGCCGCCGTGGAAACTCCGCTGGATACGACGGCGCAAAGGCGGATGCATGGTCGTGCGGCCTTGTCCTCTACAATCTCCTCGCCGGAAGCCTCCCGTTCAACGACTCGAACATTCCGGAGATGTGCCGGAAGATTTCCCGGCGAGATTACCGGTTTCCAGAGTGGATCTCGAAACCTGCGCGTTTCGTAATCTACCGGTTACTCGACCCGAACCCGGAAACCCGCATGAGCGTGGAGGCTCTCTACCAGAACTCATGGTTCAAGAAATATTTAAAACCCGAGCCCGAAGAGAGTGTGTTCGGGTCGGATCCTTCTTATGAGAGCTCTTGTAAAGGGATTAACAATAAGGGAATGAATGCGTTTGATATAATTTCTATGTCTTCCGGTTTGGACTTGAGGGGGTTATTTGAAACGACGTCGTTTGGGGATAGGAGGGAGAAGAGGTTTACGTCAAATGCTAAGGTAGAGGTGGTGGAGGCGAAGGTGAAGGAAATTGGAGGGGATTTAGGGTTTAGGGTTGAGGTTGGAAAGAATGGAGCGATTGGGTTGGGGAAAGGGAAGGTGGTGTTGGTGGTGGAGGTTCTTGAGATTGTAGAGGGTGAGTTGTTAATGGTAGATGTTAGGGTTGTTGAAGGTGGTTTGGAATTTGAGGAGCTTCACTGGAGGGACTTGAAAGATGGGTTGCAAGATGTTGTCCTTTCTTGGCATAATGAATCACCACCACTGCCACTACCACAATCACAATCACCAGTGTTGTGA 1359 0.5489 MEPTLHAQQTPSPPQTSPRSSTIILGKYQLTRLLGRGSFAKVYQALTLSDGSTVAVKIIDKSKTVDAAMEPRIVREIAAMRRLHHHPNILKIHEVMATKTKIHLVVEFAAGGELFAKILRRGPLPEQAARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDASGNLKVSDFGLSALPEQLNNGLLQTACGTPAYTAPEILRRRGNSAGYDGAKADAWSCGLVLYNLLAGSLPFNDSNIPEMCRKISRRDYRFPEWISKPARFVIYRLLDPNPETRMSVEALYQNSWFKKYLKPEPEESVFGSDPSYESSCKGINNKGMNAFDIISMSSGLDLRGLFETTSFGDRREKRFTSNAKVEVVEAKVKEIGGDLGFRVEVGKNGAIGLGKGKVVLVVEVLEIVEGELLMVDVRVVEGGLEFEELHWRDLKDGLQDVVLSWHNESPPLPLPQSQSPVL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90640g00033 452 MobiDBLite consensus disorder prediction 1 20 - -
Stsc90640g00033 452 Gene3D Phosphorylase Kinase; domain 1 30 113 - -
Stsc90640g00033 452 FunFam Non-specific serine/threonine protein kinase 21 113 - -
Stsc90640g00033 452 CDD CIPK_C 319 429 - -
Stsc90640g00033 452 Gene3D Kinase associated domain 1, KA1 314 433 - -
Stsc90640g00033 452 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 377 - -
Stsc90640g00033 452 Gene3D Transferase(Phosphotransferase) domain 1 114 301 - -
Stsc90640g00033 452 SUPERFAMILY Protein kinase-like (PK-like) 24 297 IPR011009 -
Stsc90640g00033 452 Pfam Protein kinase domain 28 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90640g00033 452 FunFam Non-specific serine/threonine protein kinase 18 314 - -
Stsc90640g00033 452 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Stsc90640g00033 452 Pfam NAF domain 318 374 IPR004041 GO:0007165
Stsc90640g00033 452 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Stsc90640g00033 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Stsc90640g00033 452 SMART serkin_6 28 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90640g00033 452 ProSiteProfiles Protein kinase domain profile. 28 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90640g00033 Stsc-Chr90640 209338 211790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90640g00033 9 437 CBL-interacting serine-threonine protein kinases AT4G14580 60.369 1.58e-172 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc90640g00033 Pkinase 5.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90640g00033 K12761 - gmx:100784173 609.757