Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90640g00022 ATGGCAAGGGACGGGAGCGTGGTCCCGGCGGACCCGCAGGCGATGGCGGTGGTGAAGAAGAAGACACAGTCATCAAGAAGTTGGATTCTGTTTGATGCATCTGGGAAAGGGTCTCTGATGGATGTGGACAAGTATGCCATCATGCACAGGGTTCAGATTCACGCTCGTGATCTCAGGATCCTTGATCCCTTGCTCTCTTACCCTTCCACCATCCTCGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAGGCAATTATCACAGCTGAAGAGGTATTGCTGCGAGATCCGACGGATGATAACGTGGTCCCTGTTGTTGAGGAGCTGCAAAGACGACTGCCTCAAGTAGGTTCTGGTCAGCAACAAGAAGGGGATGGTAAAGAGTACAATGTTGGTCAACATGATATGGAAGGAAATGAAGAAGATGAGTCACCCTTTGAGTTCCGTGCTTTGGAGGTAGCTTTAGAAGCCATTTGTAGTTTCCTTGCTGCACGCACAACAGAATTGGAGATGGCTGCTTATCCTGCATTGGATGAACTTACCTCTAAGATTAGCAGCCGTAATTTGGACAGAGTTCGAAAATTGAAGAGTGCAATGACTAGGCTGACTGCTAGGGTGCAAAAGGTGAGAGACGAACTTGAACAGCTACTGGACGACGATGATGATATGGCTGATCTCTACTTATCAAGAAAGTTGGCAAGCGCATCACCAGTTAGTGGATCACGTGGTGGTGGTGGTGGTGGTTCTTGGTTTGCTGCTTCCCCCACCATAGGATCAAAGATATCCAGAGCGAGTAGAGCAAGTTTAGCCACGGTTCATTTGGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTTGAGGCTTATTTCATGCAAATCGATGGCACATTGAACAAATTAACCACGCTTCGAGAGTATATTGATGATACTGAAGATTATATCAATATTCAAAATTATCTTTTTTTTGGGCAGCTTGACAATCATCGAAATCAACTTATTCAGTTAGAACTCTTCCTTAGCTCTGGAACTGTGTGCCTAGCTTTCTTTTCCTTGGTGACTGGAATATTTGGCATGAACATTCCATATACCTGGAATCAAAACCATGGTTACATGTTCAAATGGGTTGTTATTATCACTGGAACAATTGCTGCAGTTACATTTCTGTTGATTATTGCTTATGCTCGGAAAAAAGGGTTAGTTGGATCATGA 1215 0.4444 MARDGSVVPADPQAMAVVKKKTQSSRSWILFDASGKGSLMDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDDNVVPVVEELQRRLPQVGSGQQQEGDGKEYNVGQHDMEGNEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLASASPVSGSRGGGGGGSWFAASPTIGSKISRASRASLATVHLDENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQNYLFFGQLDNHRNQLIQLELFLSSGTVCLAFFSLVTGIFGMNIPYTWNQNHGYMFKWVVIITGTIAAVTFLLIIAYARKKGLVGS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90640g00022 404 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 340 392 IPR045863 -
Stsc90640g00022 404 Gene3D - 13 99 - -
Stsc90640g00022 404 MobiDBLite consensus disorder prediction 130 144 - -
Stsc90640g00022 404 Pfam CorA-like Mg2+ transporter protein 294 392 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc90640g00022 404 MobiDBLite consensus disorder prediction 115 144 - -
Stsc90640g00022 404 Coils Coil 194 221 - -
Stsc90640g00022 404 Gene3D Magnesium transport protein CorA, transmembrane region 108 334 - -
Stsc90640g00022 404 Gene3D Magnesium transport protein CorA, transmembrane region 341 400 - -
Stsc90640g00022 404 CDD Mrs2_Mfm1p-like 28 401 IPR039204 -
Stsc90640g00022 404 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 402 IPR039204 -
Stsc90640g00022 404 FunFam Magnesium transporter MRS2-1 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90640g00022 Stsc-Chr90640 106827 111630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90640g00022 1 377 MRS2 Gene Family AT5G64560 78.364 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90640g00022 K16075 - gmx:100810239 634.409