Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90639g00016 ATGACATTGGTTATCAGAGAAAGGAGGCACCAACAAGCTCTAAGGCTCTCTCTGCCGCAAAGAAACCCTCCTTCCTTGTCGTCTTCATCGTCGACGTCGCCGCGAACACCATCTCATCCTCATGCATCACTATCGTTATCTGGATCTTCTTCATCCTCCTCCTCGGTGGTAGTTAGCCTCTCAGACCTCGAGAAGCTGGCGGTTCTTGGTCATGGAAACGGTGGCATAGTGTACAAGGTTCGACACAAGAAGAGTCATTGCTTATACGCATTGAAAGTGATACGCTCCAACACCATCATTGGCATTAATGGCATCCCTAACCACGTGGAGGCAGAGATTCTGAAGAAGATGGATTCGCCGTACGTAGTGAAGTGCCATGCGGTTTTCGACAACGGTTCGTGCAGTGACAATGGTGTGAGCTTTGTTATGGAGTACATGGGTGGAGGCTCCTTGTATGATATCTTGAAACATCATCGTACACTCTCCGAGGACGTGATCTCTGAGGTTGCGAAGCGCGTCTTGGAAGGGCTTAACTATTTGCATGCCATGCACGTTGTTCACAGAGACATTAAGCCCTCAAACTTGCTCGTCAATGACAAGGGTGAGGTGAAGATAGCAGATTTTGGTGTCAGCCACGTGGTGGTGGAAGAGAAAGAGAAAGAGAGTAATGGTGGTGGTGGTGATTATGATCTTCATCACTATGGCAATGCAGGCACGTGTGCATACATGAGTCCTGAGAGGATTGATCCTGAGACTTGGAGAGGAGGAGGAGGTGGTGAGAAGAACAAGAACAATGGTGGGGATGATTTCGCCGGTGATGTTTGGTCGGTGGGGGTGGTGGTTTTGGAGTGTTTGCTGGGGCATTTTCCTTTGATTGGAGCGGAACAGAGACCAGACTGGGCAACACTTATGTGTGCAATTTGCTTTGGAGAAAAGGTGGAGATGCCGGAGACGGCGTCGCCACCGTTCAAGAGCTTTGTACTGAGGTGTCTTGAGAAGGATTGGAGGAAGAGGGCAACAGTGAAGGAGCTTCTTCAACACCCTTTTGTGAATAGAGGGGGGTGTTGCAATTTCAGTAGAAAAAGGCTTGGTGATTATGTTGTTCTTCAGGGGTGA 1116 0.4901 MTLVIRERRHQQALRLSLPQRNPPSLSSSSSTSPRTPSHPHASLSLSGSSSSSSSVVVSLSDLEKLAVLGHGNGGIVYKVRHKKSHCLYALKVIRSNTIIGINGIPNHVEAEILKKMDSPYVVKCHAVFDNGSCSDNGVSFVMEYMGGGSLYDILKHHRTLSEDVISEVAKRVLEGLNYLHAMHVVHRDIKPSNLLVNDKGEVKIADFGVSHVVVEEKEKESNGGGGDYDLHHYGNAGTCAYMSPERIDPETWRGGGGGEKNKNNGGDDFAGDVWSVGVVVLECLLGHFPLIGAEQRPDWATLMCAICFGEKVEMPETASPPFKSFVLRCLEKDWRKRATVKELLQHPFVNRGGCCNFSRKRLGDYVVLQG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90639g00016 371 MobiDBLite consensus disorder prediction 16 51 - -
Stsc90639g00016 371 Gene3D Phosphorylase Kinase; domain 1 41 147 - -
Stsc90639g00016 371 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 28 352 - -
Stsc90639g00016 371 SMART serkin_6 63 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90639g00016 371 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Stsc90639g00016 371 CDD PKc_MAPKK_plant_like 62 351 - -
Stsc90639g00016 371 Gene3D Transferase(Phosphotransferase) domain 1 148 360 - -
Stsc90639g00016 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Stsc90639g00016 371 SUPERFAMILY Protein kinase-like (PK-like) 61 352 IPR011009 -
Stsc90639g00016 371 ProSiteProfiles Protein kinase domain profile. 63 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90639g00016 371 Pfam Protein kinase domain 64 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90639g00016 Stsc-Chr90639 80504 81619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90639g00016 1 351 MAP Kinase Kinase Gene Family AT1G32320 50.712 5.21e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Stsc90639g00016 Pkinase 1.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90639g00016 K20604 - adu:107487017 602.053