Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90639g00015 ATGAGTGGAGTGAGTACCAGCGGTGGAGACGACGGCGGCGGTATGCCGGCGCCGGCACCGATGCCGAGCGCGAACACTCCGCCGCCGTTCCTGAGCAAGACTTACGACATGGTAGAGGACCCTTCGACGGACCCGATAGTGTCTTGGAGCGCAACGAACAACAGCTTCGTGGTTTGGAACCCACCCGAATTCGCGAGGGACCTTCTCCCTAAATACTTCAAGCACAACAATTTCTCCAGCTTCGTTCGGCAGTTGAACACTTACGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAGTTTGCAAATGAAGGATTTTTGAGGGGTCAAAAGCACTTACTTAGAACTATAACCCGGCGGAAACCTGCCCATGGTCATACTCATCAACAGGCTCCCCAATCACATGGACAGACTTCATCAGTAGGGGCATGTGTAGAAGTTGGGAAGTTTGGGATTGAGGAAGAGGTTGAGAGACTTAAAAGAGATAAGAACGTGCTCATGCAAGAGCTTGTGAGGTTGCGACAGCAGCAACAAGCCACTGATAGCAAGATGCAGACAATGGCTCAGCGCCTGCATGGAATGGAACAAAGACAACAACAAATGATGTCATTTCTTGCAAAAGCTGTTCAAAGCCCTGGATTCTTTGCTCAGTTTGTGCAGCACCAAAATGAGAATAATAGGCGCATAACTGAAGTCAGTAAAAAGCGTCGTCTCAGGCCGGAAGGCACTTTTGAACCTGAGCCTGCTACTGTTCCCGACGGACAAATTGTGAAATATCAGCCTATGATGAATGATGTAGCAAAATCAATGCTAAAGCAAATCATCAAATGGGATGGTTCTCATGTTGATGCTCTAAGTACAAACTCTGATAATTACTTGATTGCCAATGGTTCATCTAGTAGTGCATTGGACATGTCTTCAACCTGGCCGTCTGGTTCTGGAGTATCACTTCAAGAGGTTCCTCCGACTTCAGTGCAGTCTTCCCCCACACCTGCTGCAACAGGGACTCAAGGACACGCCCCATTGTCAGCCAAACCTGAAGTTCCGTCTTTACCAAAAGCTGCAGCTCCTGAAAAAGTTACACAGGATGGATCTTCGGGGGCACCTCCTCTCCATGTTTCTCAAGCAGATGTTATCATGCCTGATCTTTCACCGATAAATGAGACAGAACCAGGAAGTATTATTGAAATGCCCCAAAAAAATTATACGGGGCCAGAGAAAGGGGACGAGGGATTTATGGATCCTAATTCACTGGGAGTTGGTGGGTCGTTCCCCATTGATTTGGATGGGTTTTCACCTGAAATAGACATCGAAGATTTCTTATCCAATCCTTCTATCTGGGATGATCTCTTACAGACTCCAGGGCCCATTGATATTGAGGAAGATGTTGTCGAGGATTCCAATGGTAATGAGGTGGAAACAATAGAAACTGGATGGGACAAAATTCAGCACATGGATTACCTTACTGAGCAGATGGGTCTTCTTTCTCCAGATGCACAAAAAGAAGTTTGA 1509 0.4718 MSGVSTSGGDDGGGMPAPAPMPSANTPPPFLSKTYDMVEDPSTDPIVSWSATNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLRTITRRKPAHGHTHQQAPQSHGQTSSVGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATDSKMQTMAQRLHGMEQRQQQMMSFLAKAVQSPGFFAQFVQHQNENNRRITEVSKKRRLRPEGTFEPEPATVPDGQIVKYQPMMNDVAKSMLKQIIKWDGSHVDALSTNSDNYLIANGSSSSALDMSSTWPSGSGVSLQEVPPTSVQSSPTPAATGTQGHAPLSAKPEVPSLPKAAAPEKVTQDGSSGAPPLHVSQADVIMPDLSPINETEPGSIIEMPQKNYTGPEKGDEGFMDPNSLGVGGSFPIDLDGFSPEIDIEDFLSNPSIWDDLLQTPGPIDIEEDVVEDSNGNEVETIETGWDKIQHMDYLTEQMGLLSPDAQKEV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90639g00015 502 MobiDBLite consensus disorder prediction 1 37 - -
Stsc90639g00015 502 MobiDBLite consensus disorder prediction 299 409 - -
Stsc90639g00015 502 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 300 IPR027725 -
Stsc90639g00015 502 PRINTS Heat shock factor (HSF) domain signature 68 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Stsc90639g00015 502 PRINTS Heat shock factor (HSF) domain signature 30 53 IPR000232 GO:0003700|GO:0006355|GO:0043565
Stsc90639g00015 502 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Stsc90639g00015 502 Coils Coil 148 175 - -
Stsc90639g00015 502 SMART hsfneu3 26 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Stsc90639g00015 502 Pfam HSF-type DNA-binding 30 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Stsc90639g00015 502 Gene3D - 23 120 IPR036388 -
Stsc90639g00015 502 MobiDBLite consensus disorder prediction 120 139 - -
Stsc90639g00015 502 FunFam Heat shock transcription factor 1 23 120 - -
Stsc90639g00015 502 MobiDBLite consensus disorder prediction 299 336 - -
Stsc90639g00015 502 ProSitePatterns HSF-type DNA-binding domain signature. 69 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Stsc90639g00015 502 SUPERFAMILY "Winged helix" DNA-binding domain 25 119 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90639g00015 Stsc-Chr90639 73558 76455 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90639g00015 1 498 HSF AT1G32330 51.052 1.05e-161 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Stsc90639g00015 HSF_DNA-bind 5.4e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90639g00015 K09419 - gmx:100815121 696.427