Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90639g00013 ATGGAGCAGAAGAGGAGAATTGACAAAGAAAGCAGTTCTCAGGGTTTTAGGAAGGTGGATCCAGATCGATGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAAAAGCACTTGCTTAGGAATATAACACGAAGAAAACCTGCCCATGGTCATAATCATCAACAATCTCAGCAATCACATGTACAAAATTCGTCAGTAGGGGCATGTGTAGAAGTTGGTAAGTTTGGGCTCGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAAAATGTGCTCATGCAGGAACTTGTCAGGCTGAAACAGCAACAACAGACCACTGATGGCCAGCTGCAAGCAATGGTTCAACGCCTTCAGGGCATGGAGCAAAGACAACAACAAATGATGTCATTCCTTGCTAAAGCTGTTCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAAAATGAGAATAATAGGCGTATAACTGAAGTCAACAAAAAGCGCCGGCTCAAGCAAGAAGGTATTGCTGAAGCTGACAGTGCTTCTGCTCCTGATGGGCAAATTGTTAGATATCAACCTCCAATTAACGATTCAGCAAAAGCAATGCTCAGACAGATCATGAAATGGGATACTTCTCGTGCAGAATCTTTTAGTAAAAACCCTGATAATTACTTGATTGGTGATCGATCGTCATCATCATCTGGTGCAATGGACAGTGGCAGCTCTTCAAGCTGGACCTCTGGTGTAACACTTCAGGAGGTCCCTCCAACTTCAGTGCAGTCTTCTCATATTCCAATTACGCCAGGGGCTTCAGGGCATGTACCCTCAATTGCCAAACGTGAAATTCAATCTTTACCGCAAGCTGGAGCTCCTGAAAAGGATTCAAAGGATGGAGCATCTGACTTACCTTCTATCCATGTTCCTCAAGCAGATGTCCTCATGCCTGATCTTGCACCAATAGATGAAATAGAGTCAGGAAGTATGCTTGGTATTCCTGAAGATAATTATATGGCTCCTGAAGCTGGTGATGAGGGATTCATGGATCCTGATTCATTGGGGGTTAGTGGATCATTTCCCCTTGATTTTGAAGGAATTTCACCTGATGCAGACATTGACGACTTGTTAGGAAATCCTTCTATTTGGGATGATCTTTTGCAAACCCCAGCACAAGAGGATACTGAGACTGATGTTGAAGTTTCCAAAGATGATGAGGTGCAACCAGCTGAAAATGGTTGGGATAAAACTCAACATTTGGATCAACTAACAAAGCAGATGGGTCATCTTTCTTCTGAGACAAAATAG 1281 0.434 MEQKRRIDKESSSQGFRKVDPDRWEFANEGFLRGQKHLLRNITRRKPAHGHNHQQSQQSHVQNSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLKQQQQTTDGQLQAMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNENNRRITEVNKKRRLKQEGIAEADSASAPDGQIVRYQPPINDSAKAMLRQIMKWDTSRAESFSKNPDNYLIGDRSSSSSGAMDSGSSSSWTSGVTLQEVPPTSVQSSHIPITPGASGHVPSIAKREIQSLPQAGAPEKDSKDGASDLPSIHVPQADVLMPDLAPIDEIESGSMLGIPEDNYMAPEAGDEGFMDPDSLGVSGSFPLDFEGISPDADIDDLLGNPSIWDDLLQTPAQEDTETDVEVSKDDEVQPAENGWDKTQHLDQLTKQMGHLSSETK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90639g00013 426 MobiDBLite consensus disorder prediction 166 185 - -
Stsc90639g00013 426 MobiDBLite consensus disorder prediction 1 20 - -
Stsc90639g00013 426 Coils Coil 74 101 - -
Stsc90639g00013 426 MobiDBLite consensus disorder prediction 210 267 - -
Stsc90639g00013 426 MobiDBLite consensus disorder prediction 379 426 - -
Stsc90639g00013 426 MobiDBLite consensus disorder prediction 210 260 - -
Stsc90639g00013 426 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 231 IPR027725 -
Stsc90639g00013 426 Gene3D - 3 46 IPR036388 -
Stsc90639g00013 426 MobiDBLite consensus disorder prediction 406 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90639g00013 Stsc-Chr90639 68767 72745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90639g00013 9 425 HSF AT1G32330 48.848 1.10e-116 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90639g00013 K09419 - gmx:100815121 563.533