Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90638g00034 ATGTTAGATTTCTCATCAAGCTCTAATGTAATCATGTTTCAATGGAAAGGGTTCTTGCTTTTATTCAATACCTTTATTCTTTTGTGTTCTCAATCTTATTCTGCCAGCAGAGGTTGTGTCCTTAACATTGAATATTCTTCAACCTTGAATAACTCAGACTGTGAACGTCATCAGAGTTGGGGAGGATTCATCAGTAGCTGTTGTGAACCACTTTTTGATGATTACCTTTATGCCTTGGGGCTTCATGCCAACAAAACTGGAAACATATTCTTGAACTCCTCAGAGCAAGAAAACTGCTTCGTGTCGTCGGAGAATTTCAAGCTCTGCGGCGAGGTCAAGAAGTTGACAAGGGGAACCGGCGGTTGCTCTGATTACACTGTCATTGATGTCACCAACAAGCTTGGTGAAAATTTAAGGAGATTAGATGAAGAGTGTATGAATGGCAAGCCAAATGGAAACTGCAGTTCATGCTTGGAATCATGGGAAGATATAGTTGTAAGATCGGAGAGTTTCAGTGATGATGTTTGCAGGTTTGCTGTTCTAATCTCAATGACAAGCAGCAAAATTTATGATAGAGAATCAATCCAGAAAGTTTATAACTGTATAGGGGGGAACACCATTTCTGCAGATAAGCAAGAAGTAGAAGCAAGGGAGGGAAATTCTAAGCCAGGTCTCAAGATTCTAGCCTTTGCTTTAACTGGAGTCATAGTAGTAGCAGTACTTCTTGCAGCACTTGCATTTTCTGTTAGAAGAAAAAGAGGTGCTAAAATCCCCACATTACTAGAAGATTATGAGGACTCAGCATCACTTAAAATAACTTTGAAGGATGTTTATGTAGCCACTAACAATCTCTGCGCCGCGAATTTCATTGGCCAAGGTGCAGCAGGGAAAGTGTATAAAGGCATACTCTCCAATGGTCTACATGTTGCAGTGAAGCATATTACCAATGAAAGTTACATGGAAACATTTGTGAGAGAAGTGAAAAGCCTTTCCCATGTTAAACATCCGAACCTTGTTGCGCTGCTCGGATACTGCGAAAACAATGAATCCGAATGCTTCCTAGTCTATGAACTGTGCAACAATGGAAGCCTCTCACATTGGCTATTTGACTATGACAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGCTGTTGATAGTGCAAGAGGCCTTAAGTTTCTCCAGACCTACCCAGGTGGCTGCATTGTTCACCGTGATATAAAGCCAGCAAACATTCTTCTTGATGGCGATTTCCAAGCAAAACTTTCAGACTTTGGATTGTCTAAGGTTATGGATATTGGACAATCCTATGTGAGCTCAGAAGTAAGAGGAACATTTGGGTATATAGATCCTGAGTATAGGACAAATCACCATGTGAATGCCTCTGGAGATGTTTATAGCTTTGGCATAGTGTTGTTGCAACTTCTATCAGGACAAAGAGTCCTTGACACCAATTTCCATAGACCAATGTCACTCAGTAAAATGGCCAAATATTCTGCTAGAGGTGGCGATATTTCGGGATTCGCAGACCCTAAACTGAAAGGAGAGTATTGTATAGAAGCATTTGGCATGGTAATGAAGGTAGCTTTGGCTTGCATAGGGCTCAAGGAACAAAGGCCCTCTATAGTACAAGTGTTACATATTCTGGAAAAGGCACTTGATATCTCATCATCACAATAA 1680 0.406 MLDFSSSSNVIMFQWKGFLLLFNTFILLCSQSYSASRGCVLNIEYSSTLNNSDCERHQSWGGFISSCCEPLFDDYLYALGLHANKTGNIFLNSSEQENCFVSSENFKLCGEVKKLTRGTGGCSDYTVIDVTNKLGENLRRLDEECMNGKPNGNCSSCLESWEDIVVRSESFSDDVCRFAVLISMTSSKIYDRESIQKVYNCIGGNTISADKQEVEAREGNSKPGLKILAFALTGVIVVAVLLAALAFSVRRKRGAKIPTLLEDYEDSASLKITLKDVYVATNNLCAANFIGQGAAGKVYKGILSNGLHVAVKHITNESYMETFVREVKSLSHVKHPNLVALLGYCENNESECFLVYELCNNGSLSHWLFDYDKVLSWIQRLEIAVDSARGLKFLQTYPGGCIVHRDIKPANILLDGDFQAKLSDFGLSKVMDIGQSYVSSEVRGTFGYIDPEYRTNHHVNASGDVYSFGIVLLQLLSGQRVLDTNFHRPMSLSKMAKYSARGGDISGFADPKLKGEYCIEAFGMVMKVALACIGLKEQRPSIVQVLHILEKALDISSSQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90638g00034 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Stsc90638g00034 559 ProSiteProfiles Protein kinase domain profile. 284 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90638g00034 559 Gene3D Phosphorylase Kinase; domain 1 247 358 - -
Stsc90638g00034 559 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 88 550 - -
Stsc90638g00034 559 Pfam SPARK 36 168 IPR043891 -
Stsc90638g00034 559 SMART serkin_6 284 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90638g00034 559 FunFam probable receptor-like protein kinase At5g59700 359 559 - -
Stsc90638g00034 559 Pfam Protein kinase domain 289 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90638g00034 559 FunFam Serine/threonine kinase protein 248 358 - -
Stsc90638g00034 559 Gene3D Transferase(Phosphotransferase) domain 1 359 558 - -
Stsc90638g00034 559 SUPERFAMILY Protein kinase-like (PK-like) 268 550 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90638g00034 Stsc-Chr90638 157606 160106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90638g00034 226 550 Receptor kinase-like Gene Family AT1G70130 37.425 3.92e-57 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Stsc90638g00034 Pkinase 3.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90638g00034 - - gmx:100790181 691.804