Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90638g00032 ATGACAGCCTATGAGAGGCAAAGGGTATTATTGAGAGCAGCAGATCTCCTTGAGAAGCACAATGATGAGCTTGCAGCACTTGAGACCTGGGATAATGGGAAGCCATATGAACAAGCTGCTCAGATTGAAGTCCCAATGCTTGTTCGCCTTTTCCGATACTATGCTGGTTGGGCAGATAAGATCCATGGTATGACAGTTCCGGCTGATGGGCAATATCATGTGCAAACATTGCACGAACCGATCGNNNNNNNNNNCCAGATCATTCCCTGGAATTTTCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCGGCATTGGCTTGTGGCAATACTATTGTTCTCAAAACCGCGGAGCAGACACCATTGTCAGCTTTGTATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTGAAGGTGTTTTGAACGTGGTATCGGGCTTCGGTCCCACTGCTGGTGCTGCTCTTGCAAGTCACATGGATGTGGATAAGCTTGCCTTTACTGGTTCTACCGATACCGGGAAAGTTGTCCTTGAGCTAGCAGCTAGAAGCAATCTTAAGCCTGTAACTCTGGAGCTTGGTGGAAAATCTCCTTTTATTGTATGTGAAGATGCCGATGTAGATCAGGCTGTTGAGCTTGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGTTCCAGGACATATGTACATGAACGTGTATATGATGAGTTTGTCGAGAAAGCAAAGGCTCGTGCTTTGAAACGTATTGTTGGTGATCCATTCAAGAGTGGAATAGAGCAAGGTCCTCAGATCGATTCAGAACAATTTGAGAAGATACTGAAGTATATCAGATCCGGTGTTCAAAGTGGAGCTACACTTGAAACCGGGGGAGATAGACTTGGCAGCAAGGGCTTCTATGTTCAGCCTACCGTCTTCTCCAATGTTCAGGATGGCATGCTGATTGCAAAGGAAGAAATATTTGGCCCAGTGCAATCCATACTAAAATTCAGGGACCTTGATGAGGTTATTCAAAGGTCGAACAACACGCGCTATGGACTGGCAGCAGGGGTGTTCACGAAGAACATAGACACGGCGAACACCTTGACGAGAGCATTGAGAGTTGGAACAGTTTGGGTGAACTGCTTTGACACATTTGATGCAGCGATTCCATTTGGTGGTTACAAGATGAGTGGACAAGGAAGGGAAAAGGGTGAGTATAGCCTCAAGAATTACTTGCAAGTCAAGGCAGTTGTTACCCCTTTGAAGAACCCTGCATGGCTTTAG 1272 0.4568 MTAYERQRVLLRAADLLEKHNDELAALETWDNGKPYEQAAQIEVPMLVRLFRYYAGWADKIHGMTVPADGQYHVQTLHEPIXXXXQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPEGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFVEKAKARALKRIVGDPFKSGIEQGPQIDSEQFEKILKYIRSGVQSGATLETGGDRLGSKGFYVQPTVFSNVQDGMLIAKEEIFGPVQSILKFRDLDEVIQRSNNTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90638g00032 423 SUPERFAMILY ALDH-like 1 417 IPR016161 GO:0016491
Stsc90638g00032 423 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 413 - -
Stsc90638g00032 423 FunFam Aldehyde dehydrogenase family 1 member A3 1 200 - -
Stsc90638g00032 423 Pfam Aldehyde dehydrogenase family 1 413 IPR015590 GO:0016491
Stsc90638g00032 423 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 195 384 IPR016163 GO:0016620
Stsc90638g00032 423 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 217 228 IPR016160 GO:0016491
Stsc90638g00032 423 FunFam Mitochondrial aldehyde dehydrogenase 2 195 384 - -
Stsc90638g00032 423 FunFam Aldehyde dehydrogenase, putative 385 411 - -
Stsc90638g00032 423 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 189 196 IPR029510 GO:0016491
Stsc90638g00032 423 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 413 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90638g00032 Stsc-Chr90638 148274 151272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90638g00032 1 423 Aldehyde Dehydrogenase Gene Family AT3G48000 80.378 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90638g00032 K00128 - gmx:100811891 801.201