Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90638g00023 ATGGCATCAAGATCATACGCTAATCTCTTTGACTTAGCTTCTGGAGGAGATTTGCTGGATATTCCTCGCACCCCAAGAGCTCTTCCAAGGATTATGACCGTTCCTGGAATTATCTCTGACCTTGATGGTTGCGGTGCTAATGATGGGGATTCTGATGTCAGCTCTTCTAGTTGTCGGGAACGGAAGATCATTGTTGCAAATATGCTGCCATTGCATGCTAAAAGAGATACAGAGAATTCTAAGTGGTGCTTCAGTTTGGATGAGGATTCAATTTTACTACAATTGAAAGATGGATTTTCTTCTGATACAGAGGTAATTTATGTGGGTTCTCTTAAGGTTGATATAGATGCCAGTGAGCAGGAAGAAGTTGCACAGAGATTACTTGATGACTTCAATTGTGTACCTACCTTTTTATCCCATGATATCCAGAAAAAGTTCTATCTTGGGTTTTGCAAGCAGCAGCTCTGGCCTCTCTTTCATTATATGCTACCAATGTGCCCAGATCATGGTGATCGCTTTGACCGCATACTATGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCCGACAAGGTCATGGAAATAATTAATCCTGATGATGATTTTGTCTGGGTTCATGATTATCACCTGATGGTTTTGCCTACTTTCTTGAGGAAGCGATATAATCGAGTTAAACTTGGATTCTTCTTGCACAGTCCTTTTCCTTCCTCTGAAATTTATCGAACTTTACCTGTAAGGGATGAAATTTTGAGGGGACTTTTGAATGCTGATTTAATTGGTTTTCATACGTTTGATTATGCACGGCACTTCCTCTCTTGCTGCAGCAGAATGCTAGGTCTGGACTATGAATCTAAGCGAGGACATATAGGACTTGATTACTTTGGCCGTACTATATTTATCAAAATTTTGCCGGTTGGCATTCACATGGGTAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCGGCTAAATTAAAAGAGATTCAGGAAGAGTTTGAGGGTAAGAAGGTCATTGTTGGTGTTGATGATATGGATATTTTTAAAGGTATCAGTCTGAAACTTCTAGCCATGGAGCATCTACTGCAGGAGGATCCAGATATGCAGGGCAAAGTTGTTCTTGTTCAAATTGTAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAGGAAACTTATTTAATTGCCCAGAGGATTAATGATACCTATGGTTCAGAGGAATATCAGCCTGTCAAACTCATTGACCGCCCTGTTCCTCGTTTTGAGAAGAGTGCTTATTATGCTGTAGCTGAATGTTGCATTGTAAATGCAGTAAGAGATGGCATGAACCTAGTCCCATACAAATATCTAGTCTGCAGACAAGGTACTGCTAAACTAGATGAAGCATTGGGTAGGAAAATTGATTCTCCTCGAACAAGCATGCTCGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTTAGTGGGGCTATCAGGGTCAATCCCTGGGACATTGATGCCGTTGCTGACGCTCTGTGCTTGGCCCTTACTATGAATGACTCTGAGAAGCAATTGCGCCATGAGAAACACTATCGGTATGTCAGTTCTCACGATGTAGCATATTGGGCACGCAGCTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTACACCAAAAGGTGCTGGGGAATTGGCTTGGGTCTAGGGTTTAGAGTTGTTTCTCTTTCTCCTGGATTTAGGAAGTTGTCTATTGATCATATTGTTTCAGCGTACAAGCGAACTAGTAGAAGGGCCATCTTTCTTGATTATGATGGTACTGTTGTACCGCAGTCTTCTATAAATAAAGCCCCCAGCCCGGAAGTCATATCTATGCTAAACGCTCTATGTAGTGATCCCAAGAACATCGTTTTCATTGTTAGTGGGAGGGGAAGAGATTCTCTGAGTGATTGGTTCAGCTCATGTCAATTGTTGGGACTTGCTGCTGAGCATGGTTACTTTCTAAGGTGGAGTAGAGATTCTGAATGGGAATCCAGTCACTTGTCTGCAGACCTTGACTGGAAAAACATAGCGGAACCCGTCATGCAGTTGTACACAGAGGCAACTGATGGTTCCAGCATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCGGATTTTGGTTCCTGCCAAGCCAAGGAATTGTTGGATCACTTGGAAAGTGTGCTTGCAAATGAACCAGCAGTTGTTAAGAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGTATAAGTAAGGGTTTGGTAGCCGAAAAGGTTATTTCGACCATGGTTAATAGAGGTAATCCACCGGATTTTGTTATGTGCATTGGCGATGATAGGTCCGACGAAGACATGTTTGAGAGTATTTTAAGGTCAGTATCCTGCCCATCATTACCCACAACTCCAGAGATTTTCGCCTGCACTGTAGGTAGGAAGCCTAGCAAGGCAAAGTATTTTCTTGACGACACTTCGGATGTTGTTAAGTTACTTCAGGGCCTTGCTGCCTCATCCAATCCAAAACCCCGGCATCTTGCGCAATTCCAAGTTTCTTTCGAGAGCACAATTTGA 2589 0.4249 MASRSYANLFDLASGGDLLDIPRTPRALPRIMTVPGIISDLDGCGANDGDSDVSSSSCRERKIIVANMLPLHAKRDTENSKWCFSLDEDSILLQLKDGFSSDTEVIYVGSLKVDIDASEQEEVAQRLLDDFNCVPTFLSHDIQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRILWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLESVLNLPSTSAKLKEIQEEFEGKKVIVGVDDMDIFKGISLKLLAMEHLLQEDPDMQGKVVLVQIVNPARGSGKDVQEAKKETYLIAQRINDTYGSEEYQPVKLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYLVCRQGTAKLDEALGRKIDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALCLALTMNDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVVSLSPGFRKLSIDHIVSAYKRTSRRAIFLDYDGTVVPQSSINKAPSPEVISMLNALCSDPKNIVFIVSGRGRDSLSDWFSSCQLLGLAAEHGYFLRWSRDSEWESSHLSADLDWKNIAEPVMQLYTEATDGSSIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGISKGLVAEKVISTMVNRGNPPDFVMCIGDDRSDEDMFESILRSVSCPSLPTTPEIFACTVGRKPSKAKYFLDDTSDVVKLLQGLAASSNPKPRHLAQFQVSFESTI 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90638g00023 862 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
Stsc90638g00023 862 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 313 - -
Stsc90638g00023 862 Pfam Trehalose-phosphatase 596 831 IPR003337 GO:0003824|GO:0005992
Stsc90638g00023 862 CDD GT20_TPS 61 546 IPR001830 GO:0003824|GO:0005992
Stsc90638g00023 862 Gene3D Glycogen Phosphorylase B; 314 530 - -
Stsc90638g00023 862 FunFam Alpha,alpha-trehalose-phosphate synthase 315 530 - -
Stsc90638g00023 862 Gene3D Glycogen Phosphorylase B; 54 313 - -
Stsc90638g00023 862 Gene3D - 592 707 IPR023214 -
Stsc90638g00023 862 Gene3D - 722 852 IPR023214 -
Stsc90638g00023 862 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 841 IPR001830 GO:0003824|GO:0005992
Stsc90638g00023 862 NCBIfam HAD-IIB family hydrolase 594 795 IPR006379 -
Stsc90638g00023 862 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Stsc90638g00023 862 NCBIfam trehalose-phosphatase 591 840 IPR003337 GO:0003824|GO:0005992
Stsc90638g00023 862 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 550 - -
Stsc90638g00023 862 CDD HAD_TPP 594 835 - -
Stsc90638g00023 862 SUPERFAMILY HAD-like 593 841 IPR036412 -
Stsc90638g00023 862 Pfam Glycosyltransferase family 20 61 546 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90638g00023 Stsc-Chr90638 107653 112232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90638g00023 1 862 Trehalose Biosynthesis Gene Families AT1G23870 76.152 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90638g00023 K16055 - gmx:100775779 1590.47