LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc90638g00013	ATGAGTTTGAGTATGAGCTATTGTGCAAGTTACGGCCTTCGTCTTCGACCTTCGGGACTTGCTAACTCTAATCTTCAACCACATGGCAGGAATATTGTTCCTATCAACACACCCAAGGAACTTCCAAAATATGACAATTGTCTTCAGTCAAAGCTCAAGATTCGTACTAGCAATACTGTCAAGACTTTAATGGGTGCCATGGCAGTCACACACTTGATTGCTCCAGTTGCTGCAAAAGCTGAAGTAGCTGCTTCTGTTTATTCTTTGGCTGATGCAAACCTAAGTGACTGGTTTGGAGGTTTAATGTATTCAGCTGGGCAACAGGCCAATGAAGCCGTTCAGAGCCAATTATCTTCTCCCAGTTTCACCAGTTTGGCAGTAATTTTTGGGGCAGGGCTTGTAACCAGTCTTTCTCCTTGTACACTCAGTGTCTTACCACTGACCCTTGGTTACATTGGGGCATTTGGCTCTGGAAAAAGTAGAGCAGAGGTTATTGGGGATTCAATTGCATTCTCCTTGGGTCTTGCAACCACATTAGCCCTTTTGGGAGTTGCTGCATCATTTGCTGGAAAGGCTTATGGACAGATAGGCCAAGGATTACCACTGGCTGCTTCTGGTTTGGCTGTAATTATGGGTCTGAACCTTCTTGAGATCATTGAATTGCGGCTCCCGTCGTTCTTTGACAGTTTTGATCCACGTGCAGCAGCTGCCAATTTCCCATCAAGTGTGCAAGCATATCTGGCTGGGCTTACATTTGCTTTAGCTGCATCGCCTTGCAGCACACCTGTACTGGCCACCCTTCTAGGTTATGTTGCTGCATCCAAGGATCCATTGATCGGGGGCAGCTTACTTTTGACATACACAACTGGCTATGTTGCTCCCTTACTCTTAGCTGCTTCTTTTGCTGGAGCATTACAGAGCTTGCTTTCATTTCGCAAGTTCTCAGCATGGATCAATCCCATAAGTGGAGCAATGCTGCTAGGAGGTGGTGTGTATACTTTCTTAGATAGGCTGTTCCCTGCAACAATGGTGATGTAG	1038	0.4586	MSLSMSYCASYGLRLRPSGLANSNLQPHGRNIVPINTPKELPKYDNCLQSKLKIRTSNTVKTLMGAMAVTHLIAPVAAKAEVAASVYSLADANLSDWFGGLMYSAGQQANEAVQSQLSSPSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGDSIAFSLGLATTLALLGVAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPLIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc90638g00013	345	Pfam	Cytochrome C biogenesis protein transmembrane region	128	335	IPR003834	GO:0016020\|GO:0017004
	Stsc90638g00013	345	PANTHER	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	119	344	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc90638g00013	Stsc-Chr90638	57382	61019	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc90638g00013	1	345	Chloroplast and Mitochondria Gene Families	AT5G54290	67.877	1.26e-142	406

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc90638g00013	-		-	gmx:100807029	548.895