Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc90638g00012 | ATGCCATTTGCTTTGGTCTCGGCCTGGAACAAGCGCCGTCGAAGCAAGTCTCAAGATCATGCAGACCCTTGGATTTATAGGCCTGCAGAGTTTTGGCAACTCGAAGATCAAGCGCCAAAAGCTACAAAAAAGAGGCATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGATAATCTTCTTGGAAAAGGTGGATTTGGAAAGGTTTACAGAGGAACTCTGCGTTCAGGAGAGGTTGTAGCAATAAAAAAGATGGAGCTGCCGGCGATTAGAGAAGCGGAAGGAGAGCGCGAATTCCGGGTGGAAGTGGACATATTGAGCAGACTAGACCACCCAAATCTTGTGTCCTTGATTGGCTACTGTGCTGATGGGAAGCACAGGTTCTTAGTATATGAGTATATGCAAAATGGGAACCTGCAACATCATTTGAATGGAATTGGAGAAAGAAAAATGGATTGGGCTCAAAGGCTGAAAGTGGCATTGGGAGCTGCAAAAGGACTTGCTTATCTGCATTCAAGTTCTTGTGTTGGGATCCCTATTGTTCACAGAGATTTCAAATCCACCAATGTTCTTCTAACCTCCAATTTTGAAGCAAAGATATCTGATTTTGGGCTAGCTAAACTAATGCCAGAAGGACAAGAGACACATGTAACTGCTAGAGTGTTTGGTACCTTTGGCTATTTTGATCCTGAATATACATCGACCGGAAAACTCAGTCTACAAAGCGATGTTTATTCTTTTGGGGTTGTTCTTTTGGAGCTTTTGACTGGACGTAGAGCCGTAGATCTAAACCAAGGTCCAAATGATCAAAACCTTGTGCTCCAGGTGAGACACCTACTAAATGACCGGAAGAAGCTTAGAAAGGTGATAGATGCACAGATGGCACGAAACTCATACACATTGGAGTCTATATTCTTGTTTGCAAATTTAGCATCAAGATGTGTTCGTAGTGAGAGTAGTGAGAGGCCTTCCATGATTGACTGTGTTAAACAACTTCAAATCATCATCTATACAAATTCAAAAGGCAGGCTTGGGTATGGTTATGCATAG | 1074 | 0.4274 | MPFALVSAWNKRRRSKSQDHADPWIYRPAEFWQLEDQAPKATKKRHGSSVFTLKEMEEATCSFSDDNLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIREAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQHHLNGIGERKMDWAQRLKVALGAAKGLAYLHSSSCVGIPIVHRDFKSTNVLLTSNFEAKISDFGLAKLMPEGQETHVTARVFGTFGYFDPEYTSTGKLSLQSDVYSFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHLLNDRKKLRKVIDAQMARNSYTLESIFLFANLASRCVRSESSERPSMIDCVKQLQIIIYTNSKGRLGYGYA | 357 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc90638g00012 | 357 | Gene3D | Phosphorylase Kinase; domain 1 | 30 | 141 | - | - | |
Stsc90638g00012 | 357 | ProSiteProfiles | Protein kinase domain profile. | 63 | 344 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc90638g00012 | 357 | CDD | STKc_IRAK | 69 | 343 | - | - | |
Stsc90638g00012 | 357 | ProSitePatterns | Protein kinases ATP-binding region signature. | 69 | 92 | IPR017441 | GO:0005524 | |
Stsc90638g00012 | 357 | Gene3D | Transferase(Phosphotransferase) domain 1 | 142 | 351 | - | - | |
Stsc90638g00012 | 357 | Pfam | Protein kinase domain | 64 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc90638g00012 | 357 | SUPERFAMILY | Protein kinase-like (PK-like) | 45 | 345 | IPR011009 | - | |
Stsc90638g00012 | 357 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 188 | 200 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc90638g00012 | 357 | FunFam | serine/threonine-protein kinase PBS1-like | 31 | 141 | - | - | |
Stsc90638g00012 | 357 | PIRSF | ILK | 33 | 352 | - | - | |
Stsc90638g00012 | 357 | PANTHER | OS01G0750732 PROTEIN | 33 | 345 | - | - | |
Stsc90638g00012 | 357 | FunFam | receptor-like serine/threonine-protein kinase NCRK | 142 | 352 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc90638g00012 | Stsc-Chr90638 | 54900 | 56494 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc90638g00012 | 46 | 344 | Receptor kinase-like Gene Family | AT3G58690 | 46.053 | 1.79e-88 | 270 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIb | Stsc90638g00012 | Pkinase | 2.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc90638g00012 | - | - | gmx:100820613 | 629.017 |