Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90638g00011 ATGGAGATGGAAGCATGGATAATGATAATGTTGACCATCCCTTTTCTGTATCTGATGATCAAAATAATAACATCGAGAATCGTGTATGTTAAAAGGCCATCACTGCCACCAGGTCCCATGCACATTCCAATCATAAGCAACATCATTTGGCTCACAACACATAATTCATTCTCAAAACTACGCCCACTCCTCCAACGACTCCACGCCAAACACGGCCCAATCATCACACTCCCAATCTGGTCCGGGCCCCACATCATCATAGCCGATGCCTCCATCTCTCACCAAGCTTTGCTCCAAAACGCTGCCGTTTTCGCCAACCGCCCTTACAAAACTCTTTCCACCATTCACCACCACCAACTTAACATCACCTCCTCCCCGTACGGCCCAACATTGCGCCTCCTCCGCCGCAACCTCACCTCTCATATCCTCAACCCTTCGTTTTCCTCCCTCCGCAAATCTCTCTTGCGCGATCTCCTCACCCGTCTCAAATTATCTTCATCTTTCTCCTTTAGAGTTGAAGATTATGTTCACCATGCCGTGTTCTCGATGCTGGTCTTCATGTGTTTCGGAGAAAACATCCAAGACGATAAAATCCAACACATCAAACGCATCCAGCGCACCCTAATCTCTGGCTTTAACAGGTTCAGTGTGCTGAATTTCTTGCCACGCGTGGTGTCTCGAGTGGTCTTCCCACAACGTTGCAAGGAGTATTTGCACCTTAGGGAACAACAGAAGCTCGCCTTCACGGAGCTTATGGAAGAGAGAAGATTAAGCAGGAAGAACAAAGATGATAAGCACTTTGTTTGTTACATGGATACTTTGTTGGAGTTGGTGTTACCAGCGGAGAACAATCGTAAGCTTGAGGAGGACGAAGTGATTAGCTTGTGTTCGGAGTTTCTAAGCGCCGGCACTGACACAACTTGGACGGCGCTGGAGTGGATTATGGCGAACTTGGTGAAACACCCACGCATTCAAACGAGGCTTGCGGATGAAATTGCAGAGGTGGTAGGTGAAAGAGGAGGGAACGAAGTTGAGGAAGAAGATCTGGAGAAGTTGCCATATCTGAAAGCGGTGATACTGGAAGGATTGAGACGTCACCCACCTTCGCATTTTTTGCTGCCGCACGCGGTTACCGAGGATACGGTTTTGAACGGTTACTTGATTCGTAAGAATGGGACGGTGAATTTCATGGTAGCGGAGATGGGGTGGGACCCCAAGGTGTGGGAGGATCCCATGGGGTTCGTGCCGGAGAGGTTCTTGGACGGAGGGAAGAAAGAAATGAATAAGAAGATGATGCCGTTTGGAGCGGGGAAAAGGATGTGTCCTGCTTATGGGTTGGCCATGCTGCATTTGGAATATTTGGTTGCTAATTTGGTTTTCACCTTCAAATGGAACACCGTCGACGACGGAGATAGTCTTGATTTATCGGAGAAACAAGGATTTACTGCTGCCATGAAGCATCCATTACATGCACGCATTTCCCCTAGGTTCTACTAA 1497 0.481 MEMEAWIMIMLTIPFLYLMIKIITSRIVYVKRPSLPPGPMHIPIISNIIWLTTHNSFSKLRPLLQRLHAKHGPIITLPIWSGPHIIIADASISHQALLQNAAVFANRPYKTLSTIHHHQLNITSSPYGPTLRLLRRNLTSHILNPSFSSLRKSLLRDLLTRLKLSSSFSFRVEDYVHHAVFSMLVFMCFGENIQDDKIQHIKRIQRTLISGFNRFSVLNFLPRVVSRVVFPQRCKEYLHLREQQKLAFTELMEERRLSRKNKDDKHFVCYMDTLLELVLPAENNRKLEEDEVISLCSEFLSAGTDTTWTALEWIMANLVKHPRIQTRLADEIAEVVGERGGNEVEEEDLEKLPYLKAVILEGLRRHPPSHFLLPHAVTEDTVLNGYLIRKNGTVNFMVAEMGWDPKVWEDPMGFVPERFLDGGKKEMNKKMMPFGAGKRMCPAYGLAMLHLEYLVANLVFTFKWNTVDDGDSLDLSEKQGFTAAMKHPLHARISPRFY 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90638g00011 498 SUPERFAMILY Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 CDD CYP77_89 70 490 - -
Stsc90638g00011 498 Gene3D Cytochrome P450 29 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 488 - -
Stsc90638g00011 498 Pfam Cytochrome P450 36 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Stsc90638g00011 498 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90638g00011 498 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90638g00011 Stsc-Chr90638 48322 49818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90638g00011 3 496 Cytochrome P450 AT1G64940 47.592 3.78e-155 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90638g00011 K24184 - gmx:100792037 493.812