Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90638g00001 ATGCCTCTTTTCAGTTGCTCCGATTGTGAACTCCTCTGCTGCGAGGACTCTTCAGGAGTCCTATCCGAGGAGGAGTCACAAGAATGCTCCTCTGAATCATCGTCTTCTTCATCTTCTTTATTGTCAAAATGGACAGAGGAATCTATTGCGTGTTTCATGGAACACGAGAGCAACTTCGTCCCCAGATTGGAGTACCTCTCTAGGTTTCAGTCTCGATCCCTAGACATCAACGCCAGGGAAGAATCCGTTGCATGGATACTCAAGGTTCACGCCTACCATGGCTTTCAGCCTCTGACTGGATACCTTTCCGTTAATTACTTTGATCGGTTTTTGGATTCTCAACAGTTGCCGCAAACAAGTGGGTGGAGTCTTCAGCTTCTATCAGTTGCATGTTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTTGTTCCCTCTGTCTTGGACCTTCAGGTGGAAGGAGCCAAATACATATTTGAGGCGCCAACAATACTTAGGATGGAGCTTCTTGTTCTTACTGTGTTGGATTGGAGGCTGAGATCAGTGACCCCACTTAGCTTCCTTGCTTTCTTTGCCGGCAAAATTGATTCAGCTGGAACTTTTACTGCCTTCCTCATTTCTCGAGCTACACAAATCATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTACAGGCCATCATGTATTGGTGCGGCAGCAATACTGTGTGCAGCTAATGAAATTCCTAATTGGTCTCTTGTTAAGCCTGAGAATGCCGAATCATGGTGCCAGGGACTAACAAAGGAAAAGATTATAGGGTGCTACCAGTTGATGCAAGAACTTGTGATTCACAGTAACCTGAGAAAGCCAATGAGGTCGAGTGCTCCTACTGTTCAATCATCATTCTCTTCCCTCTCTTCTTCATTATCCTTTTCTTATTCTTATAATAATAAAAGGAGAAAACTAAATGACTGTTTGGGGGTGAATGACGACGAAAAAGGAAACTCCCTGTGA 993 0.4431 MPLFSCSDCELLCCEDSSGVLSEEESQECSSESSSSSSSLLSKWTEESIACFMEHESNFVPRLEYLSRFQSRSLDINAREESVAWILKVHAYHGFQPLTGYLSVNYFDRFLDSQQLPQTSGWSLQLLSVACLSLAAKMEEPLVPSVLDLQVEGAKYIFEAPTILRMELLVLTVLDWRLRSVTPLSFLAFFAGKIDSAGTFTAFLISRATQIILSNIQEASFLAYRPSCIGAAAILCAANEIPNWSLVKPENAESWCQGLTKEKIIGCYQLMQELVIHSNLRKPMRSSAPTVQSSFSSLSSSLSFSYSYNNKRRKLNDCLGVNDDEKGNSL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90638g00001 330 SUPERFAMILY Cyclin-like 41 178 IPR036915 -
Stsc90638g00001 330 Gene3D - 62 179 - -
Stsc90638g00001 330 Gene3D - 52 242 - -
Stsc90638g00001 330 SMART cyclin_7 84 172 IPR013763 -
Stsc90638g00001 330 CDD CYCLIN_AtCycD-like_rpt2 181 271 - -
Stsc90638g00001 330 PANTHER CYCLINS 46 279 IPR039361 -
Stsc90638g00001 330 FunFam D2/4-type cyclin 62 179 - -
Stsc90638g00001 330 Pfam Cyclin, C-terminal domain 181 282 IPR004367 -
Stsc90638g00001 330 SMART Cyclin_C_2 181 302 IPR004367 -
Stsc90638g00001 330 Pfam Cyclin, N-terminal domain 49 178 IPR006671 -
Stsc90638g00001 330 CDD CYCLIN_AtCycD-like_rpt1 78 176 - -
Stsc90638g00001 330 SUPERFAMILY Cyclin-like 162 279 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90638g00001 Stsc-Chr90638 2728 6247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90638g00001 7 279 Core Cell Cycle Gene Families AT1G70210 63.273 2.80e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90638g00001 K18810 - gmx:100778578 424.091