Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90637g00077 ATGGAACCTTTCAAAGGTGTTCTAAACGACATTCGTGCAAGATCTCTGCACTATAAACAAGATTGGTCTTCTGCTATTCACTCCGGATTTGGGATATTGGCTCCAACTACCTATATTTTCTTTGCTTCTGCGCTTCCTGTTATTGCATTCGGAGAGCAGCTCAGTAGAGACACAGATGGAAGTTTGAGTACAGTAGAAACGCTAGCTTCTACAGCCATATGTGGAATCATACACTCAATATTTGGTGGTCAACCTCTTCTCATACTTGGAGTTGCTGAACCAACTATCATCATGTATACTTACCTCTACAACTTTGCCAAAGATAGGGATGGTTTGGGACAACAACTCTTTTTGGCTTGGGCAGGATGGGTTTGTGTTTGGACCGCTCTCTTGTTATTTCTTCTAGCAATATTCAATGCTGGAAATATCATCAATAGATTTACAAGGATTGCCGGTGAGCTTTTTGGAATGTTGATTACTGTCTTGTTCATTCAAGAGGCTATTAAGGGAATGGTGAGTGAGTTTAAGGTTCCTAAGGAGGGAAACCCAACACTGGATAAGTACCAGTTTCATTGGTTGTATGCTAATGGATTACTGGGTATTATATTCACCTTTGGCCTTCTCTATACTGCCTTAAAAAGCAGAAGAGCAAGGTCATGGTTATATGGAACAGGGTGGTTCAGAAATTTCATAGCAGATTATGGGGTGCCTCTGATGGTGCTGCTGTGGACAGGCCTATCATTCACAGCACCAAGTAAAGTGCCTTCTGGAGTTCCAAGAAGGCTTGTTTCTCCTCTTGCTTGGGATTCCACATCTTTGCATCATTGGACTGTCATCAAAGACATGGGCAAGGTTTCACCAACATATATATTTGCAGCTTTCATTCCTGCCATAATGATAGCCGGGCTTTATTTCTTTGACCACAGTGTTGCTTCCCAGTTAGCACAGCAGAAGGAATTCAACCTCAAGAAGCCTTCTGCATATCACTATGACATTTTGCTACTTGGATTCATGGCATGTTTCTGTTCTTACACTTAG 1038 0.4181 MEPFKGVLNDIRARSLHYKQDWSSAIHSGFGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTIIMYTYLYNFAKDRDGLGQQLFLAWAGWVCVWTALLLFLLAIFNAGNIINRFTRIAGELFGMLITVLFIQEAIKGMVSEFKVPKEGNPTLDKYQFHWLYANGLLGIIFTFGLLYTALKSRRARSWLYGTGWFRNFIADYGVPLMVLLWTGLSFTAPSKVPSGVPRRLVSPLAWDSTSLHHWTVIKDMGKVSPTYIFAAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMACFCSYT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90637g00077 345 PRINTS HCO3- transporter superfamily signature 233 242 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc90637g00077 345 PRINTS HCO3- transporter superfamily signature 47 58 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc90637g00077 345 PRINTS HCO3- transporter superfamily signature 162 174 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc90637g00077 345 PRINTS HCO3- transporter superfamily signature 316 329 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc90637g00077 345 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016020
Stsc90637g00077 345 Pfam HCO3- transporter family 194 344 IPR011531 GO:0006820|GO:0016020
Stsc90637g00077 345 PANTHER ANION EXCHANGE PROTEIN 2 343 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc90637g00077 345 Gene3D Helical hairpin bin 14 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90637g00077 Stsc-Chr90637 257907 259377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90637g00077 2 342 Antiporters AT1G74810 77.419 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90637g00077 K24194 - gmx:100811184 597.816